RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 KCTD4Q8WVF5 259 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 EID2BQ96D98 161 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 PANX3Q96QZ0 392 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 NDNQ99608 321 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 OLFM1Q99784 485 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 P2RY13Q9BPV8 354 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 ZSCAN5AQ9BUG6 496 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 HDAC8Q9BY41 377 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 DERL2Q9GZP9 239 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 P2RY12Q9H244 342 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 TFB2MQ9H5Q4 396 aaKnown RBP12.49□□□□□ -0.41
CACNB3-217ENST00000550483 STN1Q9H668 368 aaKnown RBP12.49□□□□□ -0.41
CACNB3-217ENST00000550483 PCDH12Q9NPG4 1184 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 OXSMQ9NWU1 459 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 ZDHHC3Q9NYG2 299 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 TRMT6Q9UJA5 497 aaKnown RBP12.49□□□□□ -0.41
CACNB3-217ENST00000550483 CACNA1HO95180 2353 aa12.49□□□□□ -0.41
CACNB3-217ENST00000550483 RIF1Q5UIP0 2472 aaKnown RBP12.48□□□□□ -0.41
CACNB3-217ENST00000550483 SYCE1LA8MT33 242 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 KPNA3O00505 521 aaPredicted RBP12.48□□□□□ -0.41
CACNB3-217ENST00000550483 SNNO75324 88 aaPredicted RBP12.48□□□□□ -0.41
CACNB3-217ENST00000550483 KIAA0754O94854 1291 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 ADH1BP00325 375 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 CTSLP07711 333 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 CCDC166P0CW27 439 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 CHRM1P11229 460 aaPredicted RBP12.48□□□□□ -0.41
CACNB3-217ENST00000550483 LHCGRP22888 699 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 IRF9Q00978 393 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 PFKPQ01813 784 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 OCRLQ01968 901 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 PPARDQ03181 441 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 PTSQ03393 145 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 BST1Q10588 318 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 SFSWAPQ12872 951 aaKnown RBP12.48□□□□□ -0.41
CACNB3-217ENST00000550483 CSHL1Q14406 222 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 TTLL9Q3SXZ7 439 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 LEXMQ3ZCV2 418 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 HSF5Q4G112 596 aaPredicted RBP12.48□□□□□ -0.41
CACNB3-217ENST00000550483 TECRLQ5HYJ1 363 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 SDE2Q6IQ49 451 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 PTCRAQ6ISU1 281 aaPredicted RBP12.48□□□□□ -0.41
CACNB3-217ENST00000550483 C16orf46Q6P387 395 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 ZNF549Q6P9A3 640 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 FBXL19Q6PCT2 694 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 MACC1Q6ZN28 852 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 FAM47EQ6ZV65 393 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 OTOAQ7RTW8 1153 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 PIWIL4Q7Z3Z4 852 aaKnown RBP12.48□□□□□ -0.41
CACNB3-217ENST00000550483 NLRP8Q86W28 1048 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 SERPINA9Q86WD7 417 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 WDR75Q8IWA0 830 aaKnown RBP12.48□□□□□ -0.41
CACNB3-217ENST00000550483 PLD6Q8N2A8 252 aaKnown RBP12.48□□□□□ -0.41
CACNB3-217ENST00000550483 TRAM1L1Q8N609 369 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 ACVR1CQ8NER5 493 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 PIP4K2CQ8TBX8 421 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 PDLIM5Q96HC4 596 aaKnown RBP12.48□□□□□ -0.41
CACNB3-217ENST00000550483 BIRC8Q96P09 236 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 GPR78Q96P69 363 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 COPS8Q99627 209 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 FAM83DQ9H4H8 585 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 IGSF5Q9NSI5 407 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 XPR1Q9UBH6 696 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 CDH22Q9UJ99 828 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 USH1CQ9Y6N9 552 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 MUC22E2RYF6 1773 aaPredicted RBP12.48□□□□□ -0.41
CACNB3-217ENST00000550483 COL4A3Q01955 1670 aa12.48□□□□□ -0.41
CACNB3-217ENST00000550483 ZNF106Q9H2Y7 1883 aaKnown RBP12.47□□□□□ -0.41
CACNB3-217ENST00000550483 TARM1B6A8C7 271 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 SLCO1B7G3V0H7 640 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 G3V2L1 256 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 GAPDHSO14556 408 aaPredicted RBP12.47□□□□□ -0.41
CACNB3-217ENST00000550483 KPNA5O15131 536 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 NPHS1O60500 1241 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 MAGEC1O60732 1142 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 DCTN3O75935 186 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 AP2A2O94973 939 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 C1SP09871 688 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 ELFN1P0C7U0 828 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 TPBGLP0DKB5 382 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 CBSLP0DN79 551 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 FGF3P11487 239 aaPredicted RBP12.47□□□□□ -0.41
CACNB3-217ENST00000550483 DRD1P21728 446 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 FMO4P31512 558 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 CBSP35520 551 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 RGS4P49798 205 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 CDKN2DP55273 166 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 IL2P60568 153 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 NFKB2Q00653 900 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 CREB5Q02930 508 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 STARD3Q14849 445 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 CHRNA6Q15825 494 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 TMEM52BQ4KMG9 183 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 SPDYAQ5MJ70 313 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 PTRHD1Q6GMV3 140 aaKnown RBP12.47□□□□□ -0.41
CACNB3-217ENST00000550483 ERN2Q76MJ5 926 aaKnown RBP12.47□□□□□ -0.41
CACNB3-217ENST00000550483 PARS2Q7L3T8 475 aaKnown RBP12.47□□□□□ -0.41
CACNB3-217ENST00000550483 RAB44Q7Z6P3 723 aaPredicted RBP12.47□□□□□ -0.41
CACNB3-217ENST00000550483 LDB1Q86U70 411 aaPredicted RBP12.47□□□□□ -0.41
CACNB3-217ENST00000550483 TSPAN33Q86UF1 283 aa12.47□□□□□ -0.41
CACNB3-217ENST00000550483 C10orf107Q8IVU9 208 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms