RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 IFT81Q8WYA0 676 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 OR1E3Q8WZA6 343 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 RUBCNQ92622 972 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 ZNF669Q96BR6 464 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-206ENST00000550406 SGSM3Q96HU1 749 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 WDR92Q96MX6 357 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 TCEAL2Q9H3H9 227 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-206ENST00000550406 ANKZF1Q9H8Y5 726 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 IL21RQ9HBE5 538 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 FGF22Q9HCT0 170 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 MRPL40Q9NQ50 206 aaKnown RBP12.93□□□□□ -0.34
RAB5C-206ENST00000550406 PHPT1Q9NRX4 125 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-206ENST00000550406 IL1RAPL1Q9NZN1 696 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 MARCH4Q9P2E8 410 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-206ENST00000550406 CHMP2BQ9UQN3 213 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 MAD1L1Q9Y6D9 718 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 RPS6KL1Q9Y6S9 549 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 FAM169AQ9Y6X4 670 aa12.93□□□□□ -0.34
RAB5C-206ENST00000550406 LNP1A1A4G5 178 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 GOLGA8KD6RF30 607 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 GOLGA8TH3BQL2 631 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 CACNB4O00305 520 aaPredicted RBP12.92□□□□□ -0.34
RAB5C-206ENST00000550406 EIF3HO15372 352 aaKnown RBP eCLIP12.92□□□□□ -0.34
RAB5C-206ENST00000550406 MAGEC1O60732 1142 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 MTX2O75431 263 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 USP1O94782 785 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 SLC25A14O95258 325 aaPredicted RBP12.92□□□□□ -0.34
RAB5C-206ENST00000550406 VAPBO95292 243 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 ENGP17813 658 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 PGAM1P18669 254 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 C21orf59P57076 290 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 B4GALNT1Q00973 533 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 CACNG1Q06432 222 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 ITGA9Q13797 1035 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 SMAD1Q15797 465 aaKnown RBP12.92□□□□□ -0.34
RAB5C-206ENST00000550406 ALG11Q2TAA5 492 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 ZRANB3Q5FWF4 1079 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 GPRC6AQ5T6X5 926 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 KIAA0930Q6ICG6 404 aaPredicted RBP12.92□□□□□ -0.34
RAB5C-206ENST00000550406 UNC5AQ6ZN44 842 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 ADGRG6Q86SQ4 1221 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 NXPE1Q8N323 547 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 FBXO36Q8NEA4 188 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 DDHD1Q8NEL9 900 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 OR6P1Q8NGX9 317 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 OR4L1Q8NH43 312 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 TSACCQ96A04 125 aaPredicted RBP12.92□□□□□ -0.34
RAB5C-206ENST00000550406 LRRC39Q96DD0 335 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 SCARF2Q96GP6 870 aaPredicted RBP12.92□□□□□ -0.34
RAB5C-206ENST00000550406 NUSAP1Q9BXS6 441 aaKnown RBP12.92□□□□□ -0.34
RAB5C-206ENST00000550406 ERVMER34-1Q9H9K5 563 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 TRIM39Q9HCM9 518 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 SAYSD1Q9NPB0 183 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 SMOXQ9NWM0 555 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 SAMD15Q9P1V8 674 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 ATXN10Q9UBB4 475 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.92□□□□□ -0.34
RAB5C-206ENST00000550406 SLC17A4Q9Y2C5 497 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 SLC30A1Q9Y6M5 507 aa12.92□□□□□ -0.34
RAB5C-206ENST00000550406 V9GYY5 206 aaPredicted RBP12.92□□□□□ -0.34
RAB5C-206ENST00000550406 IGLV3-16A0A075B6K0 115 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 CDX4O14627 284 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-206ENST00000550406 TNFRSF10CO14798 259 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 SGTAO43765 313 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 DNAJC6O75061 913 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 MYBL2P10244 700 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 ZNF8P17098 575 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-206ENST00000550406 ITGALP20701 1170 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 MAGEA4P43358 317 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 THOP1P52888 689 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 SRP54P61011 504 aaKnown RBP12.91□□□□□ -0.34
RAB5C-206ENST00000550406 PRAMEP78395 509 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 TMEM115Q12893 351 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-206ENST00000550406 BNIP3Q12983 259 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 PTK2BQ14289 1009 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 CRYMQ14894 314 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 DBN1Q16643 649 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 GPR33Q49SQ1 333 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 UBAP2Q5T6F2 1119 aaKnown RBP12.91□□□□□ -0.34
RAB5C-206ENST00000550406 DOK6Q6PKX4 331 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 AFTPHQ6ULP2 937 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 PRR23CQ6ZRP0 262 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 CENPUQ71F23 418 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 KANSL1Q7Z3B3 1105 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 LDB1Q86U70 411 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-206ENST00000550406 SERPINA9Q86WD7 417 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 IFT20Q8IY31 132 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 ZBED8Q8IZ13 594 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 RBFAQ8N0V3 343 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 OR56A4Q8NGH8 313 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 NAT14Q8WUY8 206 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 SKA1Q96BD8 255 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 CFAP36Q96G28 342 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 PDXPQ96GD0 296 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 FAM129AQ9BZQ8 928 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 FOXP3Q9BZS1 431 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 PHACTR1Q9C0D0 580 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 OR2AG1Q9H205 316 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 GAREM1Q9H706 876 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 ZC3H7BQ9UGR2 993 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms