RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 ASPSCR1Q9BZE9 553 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 POLR1EQ9GZS1 481 aaKnown RBP7.58□□□□□ -1.2
NEK3-201ENST00000550331 SUDS3Q9H7L9 328 aaPredicted RBP7.58□□□□□ -1.2
NEK3-201ENST00000550331 PCDH18Q9HCL0 1135 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 HAUS2Q9NVX0 235 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 GOLGA6AQ9NYA3 693 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 IP6K2Q9UHH9 426 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 AMACRQ9UHK6 382 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 GDF2Q9UK05 429 aaPredicted RBP7.58□□□□□ -1.2
NEK3-201ENST00000550331 DNPEPQ9ULA0 475 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 ST14Q9Y5Y6 855 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 BZW2Q9Y6E2 419 aaKnown RBP7.58□□□□□ -1.2
NEK3-201ENST00000550331 ICE1Q9Y2F5 2266 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 UNC13CQ8NB66 2214 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 A0A0J9YYE9 177 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 SMTNL1A8MU46 457 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 B4E171 279 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 PPM1DO15297 605 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 TRBC1P01850 177 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 PDHA1P08559 390 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 FGF3P11487 239 aaPredicted RBP7.57□□□□□ -1.2
NEK3-201ENST00000550331 CCL4P13236 92 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 HOXB4P17483 251 aaPredicted RBP7.57□□□□□ -1.2
NEK3-201ENST00000550331 CTPS1P17812 591 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 WT1P19544 449 aaPredicted RBP7.57□□□□□ -1.2
NEK3-201ENST00000550331 CA4P22748 312 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 CES1P23141 567 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 IL4RP24394 825 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 CSF2RBP32927 897 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 CSTF2P33240 577 aaKnown RBP eCLIP7.57□□□□□ -1.2
NEK3-201ENST00000550331 GARSP41250 739 aaKnown RBP7.57□□□□□ -1.2
NEK3-201ENST00000550331 TSPAN7P41732 249 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 ACTR1BP42025 376 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 GATA4P43694 442 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 ARSDP51689 593 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 STC1P52823 247 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 RAB15P59190 212 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 ACTR1AP61163 376 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 RPL26P61254 145 aaKnown RBP7.57□□□□□ -1.2
NEK3-201ENST00000550331 GALNT2Q10471 571 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 KRT81Q14533 505 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 TBR1Q16650 682 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 ANO6Q4KMQ2 910 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 PYCR3Q53H96 274 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 TXNRD3NBQ6F5E7 133 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 TIGD7Q6NT04 549 aaPredicted RBP7.57□□□□□ -1.2
NEK3-201ENST00000550331 TMEM71Q6P5X7 295 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 DOK6Q6PKX4 331 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 RIPOR1Q6ZS17 1223 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 GALNT13Q8IUC8 556 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 NRSN1Q8IZ57 195 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 SFRP1Q8N474 314 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 RCBTB1Q8NDN9 531 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 EXD1Q8NHP7 514 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 EDARADDQ8WWZ3 215 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 PATE1Q8WXA2 126 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 HTR3CQ8WXA8 447 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 MAML1Q92585 1016 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 SYN2Q92777 582 aaPredicted RBP7.57□□□□□ -1.2
NEK3-201ENST00000550331 NKD1Q969G9 470 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 COX14Q96I36 57 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 LYSMD1Q96S90 227 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 FUCA2Q9BTY2 467 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 TDRD1Q9BXT4 1180 aaKnown RBP7.57□□□□□ -1.2
NEK3-201ENST00000550331 ABCG8Q9H221 673 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 ADNPQ9H2P0 1102 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 NT5MQ9NPB1 228 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 GEMIN8Q9NWZ8 242 aaKnown RBP7.57□□□□□ -1.2
NEK3-201ENST00000550331 KCNK4Q9NYG8 393 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 VPS18Q9P253 973 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 PDP2Q9P2J9 529 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 ANAPC7Q9UJX3 599 aa7.57□□□□□ -1.2
NEK3-201ENST00000550331 RPL26L1Q9UNX3 145 aaKnown RBP7.57□□□□□ -1.2
NEK3-201ENST00000550331 A0A1W2PQJ5 194 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 AGRPO00253 132 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 DUX1O43812 170 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 MFSD11O43934 449 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 CYP1A2P05177 515 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 SKILP12757 684 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 CCNCP24863 283 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 MAN1A1P33908 653 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 UGT1A3P35503 534 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 ZNF165P49910 485 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 ARSEP51690 589 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 EPHB1P54762 984 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 CYP4F2P78329 520 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 ITKQ08881 620 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 NR1I3Q14994 352 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 PAFAH1B3Q15102 231 aaKnown RBP7.56□□□□□ -1.2
NEK3-201ENST00000550331 PTPRRQ15256 657 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 HADHQ16836 314 aaKnown RBP7.56□□□□□ -1.2
NEK3-201ENST00000550331 TDRD12Q587J7 1177 aaKnown RBP7.56□□□□□ -1.2
NEK3-201ENST00000550331 NKAPLQ5M9Q1 402 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 DCAF12Q5T6F0 453 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 NKAIN2Q5VXU1 208 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 HGSNATQ68CP4 663 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 NCBP2-AS2Q69YL0 99 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 BORAQ6PGQ7 559 aa7.56□□□□□ -1.2
NEK3-201ENST00000550331 WDR74Q6RFH5 385 aaPredicted RBP7.56□□□□□ -1.2
NEK3-201ENST00000550331 C1orf229Q6ZS94 237 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms