RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 EPHA4P54764 986 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 GFERP55789 205 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 PAFAH1B3Q15102 231 aaKnown RBP12.44□□□□□ -0.42
LETMD1-222ENST00000550274 C16orf46Q6P387 395 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 CLEC18BQ6UXF7 455 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 LYSMD3Q7Z3D4 306 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 KDELC2Q7Z4H8 507 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 SLC9B2Q86UD5 537 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 CPNE8Q86YQ8 564 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 LRRC49Q8IUZ0 686 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 CLEC18CQ8NCF0 446 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 FAM71BQ8TC56 605 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 APOBEC4Q8WW27 367 aaKnown RBP12.44□□□□□ -0.42
LETMD1-222ENST00000550274 LYSMD1Q96S90 227 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 ZPBPQ9BS86 351 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 HERPUD2Q9BSE4 406 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 THAP2Q9H0W7 228 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 STN1Q9H668 368 aaKnown RBP12.44□□□□□ -0.42
LETMD1-222ENST00000550274 PCDH9Q9HC56 1237 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 ARFGAP3Q9NP61 516 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 PRDM8Q9NQV8 689 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 RBM22Q9NW64 420 aaKnown RBP eCLIP12.44□□□□□ -0.42
LETMD1-222ENST00000550274 OGFRQ9NZT2 677 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 RCOR3Q9P2K3 495 aaPredicted RBP12.44□□□□□ -0.42
LETMD1-222ENST00000550274 CPNE7Q9UBL6 633 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 ANAPC7Q9UJX3 599 aa12.44□□□□□ -0.42
LETMD1-222ENST00000550274 UNC79Q9P2D8 2635 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 SHANK1Q9Y566 2161 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 SPTBP11277 2137 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 KIR2DS5A0A0G2JLQ3 304 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 A0A0G2JNG1 304 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 KIR2DS3K7RE56 304 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 POLR1CO15160 346 aaPredicted RBP12.43□□□□□ -0.42
LETMD1-222ENST00000550274 MATN3O15232 486 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 NUAK1O60285 661 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 NR1D1P20393 614 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 MAN1A1P33908 653 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 ZNF165P49910 485 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 UBE2IP63279 158 aaKnown RBP12.43□□□□□ -0.42
LETMD1-222ENST00000550274 TYRO3Q06418 890 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 DPYSL3Q14195 570 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 KIR2DS5Q14953 304 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 QPCTQ16769 361 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 ATP13A4Q4VNC1 1196 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 ZNF648Q5T619 568 aaPredicted RBP12.43□□□□□ -0.42
LETMD1-222ENST00000550274 HGSNATQ68CP4 663 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 RAVER1Q8IY67 606 aaKnown RBP12.43□□□□□ -0.42
LETMD1-222ENST00000550274 SH3KBP1Q96B97 665 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 EID2BQ96D98 161 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 NAP1L5Q96NT1 182 aaPredicted RBP12.43□□□□□ -0.42
LETMD1-222ENST00000550274 PLEKHG4BQ96PX9 1271 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 EFHD1Q9BUP0 239 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 NUP85Q9BW27 656 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 TRIT1Q9H3H1 467 aaKnown RBP12.43□□□□□ -0.42
LETMD1-222ENST00000550274 FAM83DQ9H4H8 585 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 RMI1Q9H9A7 625 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 DTLQ9NZJ0 730 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 SCHIP1Q9P0W5 487 aaPredicted RBP12.43□□□□□ -0.42
LETMD1-222ENST00000550274 ATXN10Q9UBB4 475 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 IP6K2Q9UHH9 426 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 DNPEPQ9ULA0 475 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 PLAAQ9Y263 795 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 ADGRG1Q9Y653 693 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 RPS6KL1Q9Y6S9 549 aa12.43□□□□□ -0.42
LETMD1-222ENST00000550274 A0A1B0GTH6 734 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 LILRA5A6NI73 299 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 PRR19A6NJB7 356 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 K7EM74 188 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 GRID2O43424 1007 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 C9P02748 559 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 MMP2P08253 660 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 FURINP09958 794 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 ANKRD34CP0C6C1 535 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 SLC2A4P14672 509 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 ZNF8P17098 575 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-222ENST00000550274 TCN2P20062 427 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 CES1P23141 567 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 CCNCP24863 283 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 GJC1P36383 396 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 RPL26P61254 145 aaKnown RBP12.42□□□□□ -0.42
LETMD1-222ENST00000550274 SH3BP2P78314 561 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 GBE1Q04446 702 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 FOXM1Q08050 763 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 MAP7Q14244 749 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 IFI16Q16666 785 aaKnown RBP12.42□□□□□ -0.42
LETMD1-222ENST00000550274 ANO6Q4KMQ2 910 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 CRTC2Q53ET0 693 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-222ENST00000550274 LACTB2Q53H82 288 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-222ENST00000550274 TDRD12Q587J7 1177 aaKnown RBP12.42□□□□□ -0.42
LETMD1-222ENST00000550274 CCDC122Q5T0U0 273 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 FAM182AQ5T1J6 154 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 TIGD7Q6NT04 549 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-222ENST00000550274 ESX1Q8N693 406 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 FATE1Q969F0 183 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 C9orf72Q96LT7 481 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 TSGA13Q96PP4 275 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-222ENST00000550274 ULBP3Q9BZM4 244 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 CARD9Q9H257 536 aa12.42□□□□□ -0.42
LETMD1-222ENST00000550274 EPB41L1Q9H4G0 881 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms