RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	CCR5	P51681	352 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	MPP1	Q00013	466 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	ATP13A5	Q4VNC0	1218 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	LDLRAP1	Q5SW96	308 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	KIAA0895L	Q68EN5	471 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	RFLNA	Q6ZTI6	216 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	SERPINA9	Q86WD7	417 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	PIANP	Q8IYJ0	282 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	DENND6B	Q8NEG7	585 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	DDHD1	Q8NEL9	900 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	BTN2A2	Q8WVV5	523 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	GLYATL1	Q969I3	302 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	TSPAN17	Q96FV3	270 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	ATXN7L3B	Q96GX2	97 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	CLPB	Q9H078	707 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	UGT1A7	Q9HAW7	530 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	UGT1A10	Q9HAW8	530 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	UGT1A8	Q9HAW9	530 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	TMBIM4	Q9HC24	238 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	WSB2	Q9NYS7	404 aa	Predicted RBP	11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	SENP1	Q9P0U3	644 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	CTNNAL1	Q9UBT7	734 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	ZFR2	Q9UPR6	939 aa	Known RBP	11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	PCDHB1	Q9Y5F3	818 aa		11.53	□□□□□ -0.56
CNOT2-223	ENST00000550160	IGHV1OR15-9	A0A0B4J2B8	117 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	TRIM49D1	C9J1S8	452 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160		K7ESF4	209 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	AGPS	O00116	658 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	QSOX1	O00391	747 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	PRMT5	O14744	637 aa	Predicted RBP	11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	PI15	O43692	258 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	FAM155B	O75949	473 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	HAUS5	O94927	633 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	SLC25A14	O95258	325 aa	Predicted RBP	11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	PAK4	O96013	591 aa	Predicted RBP	11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	ESR1	P03372	595 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	MT-ND3	P03897	115 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	GM2A	P17900	193 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	MSH3	P20585	1137 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	HNRNPA2B1	P22626	353 aa	Known RBP	11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	MAT2A	P31153	395 aa	Known RBP	11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	NSG1	P42857	185 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	SERPINB8	P50452	374 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	ADAR	P55265	1226 aa	Known RBP	11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	PPP2CB	P62714	309 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	PPP2CA	P67775	309 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	SEMA3A	Q14563	771 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	DBN1	Q16643	649 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	WSCD2	Q2TBF2	565 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	GPRC6A	Q5T6X5	926 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	MROH9	Q5TGP6	573 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	AGBL2	Q5U5Z8	902 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	FAM45BP	Q6NSW5	357 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	PNCK	Q6P2M8	343 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	ADAMTSL4	Q6UY14	1074 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	LDB1	Q86U70	411 aa	Predicted RBP	11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	GPATCH11	Q8N954	259 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	FAM45A	Q8TCE6	357 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	LPGAT1	Q92604	370 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	ELMO2	Q96JJ3	720 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	GPR22	Q99680	433 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	SH3GL2	Q99962	352 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	TSSK1B	Q9BXA7	367 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	GPR174	Q9BXC1	333 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	WDR26	Q9H7D7	661 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	CD93	Q9NPY3	652 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	PRMT8	Q9NR22	394 aa	Predicted RBP	11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	GNPTG	Q9UJJ9	305 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	DMTF1	Q9Y222	760 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	CRYL1	Q9Y2S2	319 aa		11.52	□□□□□ -0.57
CNOT2-223	ENST00000550160	FAM95C	A0A1B0GW59	222 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	FADS2P1	A8MWK0	482 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160		E5RI56	91 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	FPGT	O14772	594 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	INPP4B	O15327	924 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	SLC31A1	O15431	190 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	GPR39	O43194	453 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	LAT	O43561	262 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	VPS26A	O75436	327 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	FSBP	O95073	299 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	PRSS56	P0CW18	603 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	PKM	P14618	531 aa	Known RBP	11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	STMN1	P16949	149 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	RPS3	P23396	243 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	PXN	P49023	591 aa	Predicted RBP	11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	CDKN1C	P49918	316 aa	Predicted RBP	11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	POU4F1	Q01851	419 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	BMPR2	Q13873	1038 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	GTF2H3	Q13889	308 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	USP10	Q14694	798 aa	Known RBP	11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	IRF4	Q15306	451 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	TAF1B	Q53T94	588 aa	Predicted RBP	11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	PTRHD1	Q6GMV3	140 aa	Known RBP	11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	UGT3A1	Q6NUS8	523 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	CNST	Q6PJW8	725 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	BMP8A	Q7Z5Y6	402 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	CCDC91	Q7Z6B0	441 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	C11orf74	Q86VG3	221 aa		11.51	□□□□□ -0.57
CNOT2-223	ENST00000550160	FBXL6	Q8N531	539 aa		11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms