RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 PRRT3Q5FWE3 981 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 LDLRAP1Q5SW96 308 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 CERCAMQ5T4B2 595 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 ANKRD22Q5VYY1 191 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 ALS2CLQ60I27 953 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 PPP1R21Q6ZMI0 780 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 ERMP1Q7Z2K6 904 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 ADGRG6Q86SQ4 1221 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 NRROSQ86YC3 692 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 HID1Q8IV36 788 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 TAB3Q8N5C8 712 aaPredicted RBP11.79□□□□□ -0.52
PFDN5-208ENST00000549995 SPATA4Q8NEY3 305 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 RHBDD1Q8TEB9 315 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 CDKN2AIPNLQ96HQ2 116 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 DNAJC1Q96KC8 554 aaKnown RBP11.79□□□□□ -0.52
PFDN5-208ENST00000549995 C16orf45Q96MC5 204 aaPredicted RBP11.79□□□□□ -0.52
PFDN5-208ENST00000549995 CAMK1GQ96NX5 476 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 KIFC1Q9BW19 673 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 IL22Q9GZX6 179 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 XAB2Q9HCS7 855 aaKnown RBP11.79□□□□□ -0.52
PFDN5-208ENST00000549995 MRPL40Q9NQ50 206 aaKnown RBP11.79□□□□□ -0.52
PFDN5-208ENST00000549995 TREX1Q9NSU2 369 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 NCKIPSDQ9NZQ3 722 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 ATXN10Q9UBB4 475 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 CDC23Q9UJX2 597 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 PCDHGA1Q9Y5H4 931 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 PCYT1BQ9Y5K3 369 aaPredicted RBP11.79□□□□□ -0.52
PFDN5-208ENST00000549995 ST14Q9Y5Y6 855 aa11.79□□□□□ -0.52
PFDN5-208ENST00000549995 DCDC2BA2VCK2 349 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 SMAPO00193 183 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 INPP4BO15327 924 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 TP73O15350 636 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 YY2O15391 372 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 SIGLEC6O43699 453 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 BUD23O43709 281 aaKnown RBP11.78□□□□□ -0.52
PFDN5-208ENST00000549995 SLC25A14O95258 325 aaPredicted RBP11.78□□□□□ -0.52
PFDN5-208ENST00000549995 SLC4A1P02730 911 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 CELA2BP08218 269 aaPredicted RBP11.78□□□□□ -0.52
PFDN5-208ENST00000549995 CKMT1AP12532 417 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 TPH1P17752 444 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 FOXN2P32314 431 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 ADCY8P40145 1251 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 POLD2P49005 469 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 LMAN1P49257 510 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 ACADVLP49748 655 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 NOVA1P51513 510 aaKnown RBP11.78□□□□□ -0.52
PFDN5-208ENST00000549995 ILKQ13418 452 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 TRIP13Q15645 432 aaPredicted RBP11.78□□□□□ -0.52
PFDN5-208ENST00000549995 TRIP6Q15654 476 aaKnown RBP11.78□□□□□ -0.52
PFDN5-208ENST00000549995 KHDC1Q4VXA5 237 aaKnown RBP11.78□□□□□ -0.52
PFDN5-208ENST00000549995 PCID2Q5JVF3 399 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 TSTD2Q5T7W7 516 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 PSAPL1Q6NUJ1 521 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 FAM151BQ6UXP7 276 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 SNX20Q7Z614 316 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 C11orf96Q7Z7L8 435 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 PCGF5Q86SE9 256 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 TRIM74Q86UV6 250 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 GKN2Q86XP6 184 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 JAMLQ86YT9 394 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 PPIL6Q8IXY8 311 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 EID2Q8N6I1 236 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 DNAAF3Q8N9W5 541 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 GPR156Q8NFN8 814 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 ZNF398Q8TD17 642 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 LMX1AQ8TE12 382 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 ULK4Q96C45 1275 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 TRIM44Q96DX7 344 aaPredicted RBP11.78□□□□□ -0.52
PFDN5-208ENST00000549995 SERPINB12Q96P63 405 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 OR2M4Q96R27 311 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 TIMM29Q9BSF4 260 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 TMEM168Q9H0V1 697 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 CARS2Q9HA77 564 aaKnown RBP11.78□□□□□ -0.52
PFDN5-208ENST00000549995 CYP4F12Q9HCS2 524 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 FTSJ1Q9UET6 329 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 SOX13Q9UN79 622 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 GPR34Q9UPC5 381 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 WASF3Q9UPY6 502 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 PIKFYVEQ9Y2I7 2098 aa11.78□□□□□ -0.52
PFDN5-208ENST00000549995 A6NCN8 305 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 GIPC1O14908 333 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 GP1BAP07359 652 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 CDK4P11802 303 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 ZNF8P17098 575 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-208ENST00000549995 MC4RP32245 332 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 ARSDP51689 593 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 SARNPP82979 210 aaKnown RBP11.77□□□□□ -0.53
PFDN5-208ENST00000549995 DR1Q01658 176 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 DMPKQ09013 629 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 TMEM115Q12893 351 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-208ENST00000549995 TUBB2AQ13885 445 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 PPP1R7Q15435 360 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 WHAMMP3Q1A5X7 153 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 SKIDA1Q1XH10 827 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 PPM1JQ5JR12 505 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 GPRC6AQ5T6X5 926 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 PACS1Q6VY07 963 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 DGLUCYQ7Z3D6 616 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 GALNT13Q8IUC8 556 aa11.77□□□□□ -0.53
PFDN5-208ENST00000549995 ZNF547Q8IVP9 402 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms