RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SMPD1P17405 629 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 HOXD12P35452 270 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 ARSFP54793 590 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 KDELC1Q6UW63 502 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 PIWIL3Q7Z3Z3 882 aaKnown RBP13.65□□□□□ -0.22
HDAC7-228ENST00000548938 R3HCC1LQ7Z5L2 792 aaKnown RBP13.65□□□□□ -0.22
HDAC7-228ENST00000548938 PDZD8Q8NEN9 1154 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 ABHD11Q8NFV4 315 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 TMEM40Q8WWA1 233 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 ITPKCQ96DU7 683 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 DAPK2Q9UIK4 370 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 HTR3EA5X5Y0 456 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 TMEM247A6NEH6 219 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 C1RP00736 705 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 MTHFD2P13995 350 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 ZFP36L2P47974 494 aaKnown RBP13.65□□□□□ -0.22
HDAC7-228ENST00000548938 SERPINH1P50454 418 aaKnown RBP13.65□□□□□ -0.22
HDAC7-228ENST00000548938 ZNF157P51786 506 aaPredicted RBP13.65□□□□□ -0.22
HDAC7-228ENST00000548938 KCNK10P57789 538 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 OR4D2P58180 307 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 RCAN2Q14206 197 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 FSCN1Q16658 493 aaKnown RBP13.65□□□□□ -0.22
HDAC7-228ENST00000548938 TIGD2Q4W5G0 525 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 RASAL3Q86YV0 1011 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 SLC22A17Q8WUG5 538 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 NRBF2Q96F24 287 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 BDH2Q9BUT1 245 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 GMIPQ9P107 970 aa13.65□□□□□ -0.22
HDAC7-228ENST00000548938 WARS2Q9UGM6 360 aaKnown RBP13.65□□□□□ -0.22
HDAC7-228ENST00000548938 UPK1AO00322 258 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 UMPSP11172 480 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 DARSP14868 501 aaKnown RBP13.64□□□□□ -0.23
HDAC7-228ENST00000548938 CRHBPP24387 322 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 TMED10P49755 219 aaKnown RBP13.64□□□□□ -0.23
HDAC7-228ENST00000548938 MAXP61244 160 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 RPS3AP61247 264 aaKnown RBP13.64□□□□□ -0.23
HDAC7-228ENST00000548938 PIGFQ07326 219 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 IMPG1Q17R60 797 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 TMEM53Q6P2H8 277 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 BPIFB1Q8TDL5 484 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 PABPC5Q96DU9 382 aaKnown RBP13.64□□□□□ -0.23
HDAC7-228ENST00000548938 HEPHQ9BQS7 1158 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 DGCR6LQ9BY27 220 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 ABHD16BQ9H3Z7 469 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 SEPT3Q9UH03 358 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 TIMM22Q9Y584 194 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 KCTD3Q9Y597 815 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 CPQQ9Y646 472 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 ANKRD12Q6UB98 2062 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 NYNRINQ9P2P1 1898 aaKnown RBP13.64□□□□□ -0.23
HDAC7-228ENST00000548938 HTR1AP08908 422 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 THRBP10828 461 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 PCNAP12004 261 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 ALDH3A2P51648 485 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 KPNA1P52294 538 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-228ENST00000548938 UFM1P61960 85 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 TUBA3CQ13748 450 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 DAG1Q14118 895 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 SPATS1Q496A3 300 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 DUSP28Q4G0W2 176 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 XKR4Q5GH76 650 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 PERM1Q5SV97 790 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 ZNF549Q6P9A3 640 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 SPARTQ8N0X7 666 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 TMBIM1Q969X1 311 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 ZFP42Q96MM3 310 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 ALPK1Q96QP1 1244 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 YIPF2Q9BWQ6 316 aa13.64□□□□□ -0.23
HDAC7-228ENST00000548938 SEMA4BQ9NPR2 832 aaPredicted RBP13.64□□□□□ -0.23
HDAC7-228ENST00000548938 XYLBO75191 536 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 ALPLP05186 524 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 EEFSECP57772 596 aaKnown RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 TIAL1Q01085 375 aaKnown RBP eCLIP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 CBX2Q14781 532 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 OXA1LQ15070 435 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 AASDHQ4L235 1098 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 UBXN11Q5T124 520 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 RAB44Q7Z6P3 723 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 SNX29P2Q8IUI4 249 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 CLEC4FQ8N1N0 589 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 LEMD2Q8NC56 503 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 ASB2Q96Q27 587 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 FUNDC2Q9BWH2 189 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 AIG1Q9NVV5 245 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 ST14Q9Y5Y6 855 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 DNAH12Q6ZR08 3092 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 DYTNA2CJ06 578 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 PTGESO14684 152 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 AXIN1O15169 862 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 EEDO75530 441 aaKnown RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 CYBBP04839 570 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 FDXRP22570 491 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 GSTM2P28161 218 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 EEF1DP29692 281 aaKnown RBP13.63□□□□□ -0.23
HDAC7-228ENST00000548938 SLC26A3P40879 764 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 IHHQ14623 411 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 SNX17Q15036 470 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 SCIMPQ6UWF3 145 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 SLC16A12Q6ZSM3 486 aa13.63□□□□□ -0.23
HDAC7-228ENST00000548938 THAP5Q7Z6K1 395 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms