RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 GLOD4Q9HC38 313 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 MAGEE1Q9HCI5 957 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 OCIAD1Q9NX40 245 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 PDP2Q9P2J9 529 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 SPO11Q9Y5K1 396 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 AKR1B15C9JRZ8 316 aaPredicted RBP13.2□□□□□ -0.3
CPSF6-204ENST00000547486 PPP1R12AO14974 1030 aaPredicted RBP13.2□□□□□ -0.3
CPSF6-204ENST00000547486 GRID2O43424 1007 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 SNX2O60749 519 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 TPM1P09493 284 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 PLA2G2AP14555 144 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 PECAM1P16284 738 aaPredicted RBP13.2□□□□□ -0.3
CPSF6-204ENST00000547486 ZFXP17010 805 aaPredicted RBP13.2□□□□□ -0.3
CPSF6-204ENST00000547486 PTPN3P26045 913 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 CD68P34810 354 aaPredicted RBP13.2□□□□□ -0.3
CPSF6-204ENST00000547486 SLC1A1P43005 524 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 NFATC2Q13469 925 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 TRA2AQ13595 282 aaKnown RBP eCLIP13.2□□□□□ -0.3
CPSF6-204ENST00000547486 PRKD1Q15139 912 aaPredicted RBP13.2□□□□□ -0.3
CPSF6-204ENST00000547486 TEX44Q53QW1 395 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 ADGRG6Q86SQ4 1221 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 ZNF605Q86T29 641 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 EXD3Q8N9H8 876 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 JPH3Q8WXH2 748 aaPredicted RBP13.2□□□□□ -0.3
CPSF6-204ENST00000547486 TEKT5Q96M29 485 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 TAAR9Q96RI9 348 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 SLC38A3Q99624 504 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 SPATA16Q9BXB7 569 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 OR2AG1Q9H205 316 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 CARD9Q9H257 536 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 GOLPH3Q9H4A6 298 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 RMI1Q9H9A7 625 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 TRIM39Q9HCM9 518 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 PRDM8Q9NQV8 689 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 DDX56Q9NY93 547 aaKnown RBP13.2□□□□□ -0.3
CPSF6-204ENST00000547486 UBP1Q9NZI7 540 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 AKAP7Q9P0M2 348 aaPredicted RBP13.2□□□□□ -0.3
CPSF6-204ENST00000547486 SLC23A2Q9UGH3 650 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 TMPRSS11EQ9UL52 423 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 INTUQ9ULD6 942 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 TFR2Q9UP52 801 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 ZNF711Q9Y462 761 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 CFAP46Q8IYW2 2715 aa13.2□□□□□ -0.3
CPSF6-204ENST00000547486 GCN1Q92616 2671 aaKnown RBP13.19□□□□□ -0.3
CPSF6-204ENST00000547486 A8MU76 341 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.19□□□□□ -0.3
CPSF6-204ENST00000547486 CST8O60676 142 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 PMPCBO75439 489 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 SLC25A14O95258 325 aaPredicted RBP13.19□□□□□ -0.3
CPSF6-204ENST00000547486 SLC4A1P02730 911 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 BPIP17213 487 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 CYP4F2P78329 520 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 GPLD1P80108 840 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 HHEXQ03014 270 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 WASHC5Q12768 1159 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 NOMO1Q15155 1222 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 KHDC1Q4VXA5 237 aaKnown RBP13.19□□□□□ -0.3
CPSF6-204ENST00000547486 MANEAQ5SRI9 462 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 TMEM164Q5U3C3 297 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 SPOCD1Q6ZMY3 1216 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 AGBL5Q8NDL9 886 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 ART4Q93070 314 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 SGF29Q96ES7 293 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 SARS2Q9NP81 518 aaKnown RBP13.19□□□□□ -0.3
CPSF6-204ENST00000547486 SCHIP1Q9P0W5 487 aaPredicted RBP13.19□□□□□ -0.3
CPSF6-204ENST00000547486 PCDHGA3Q9Y5H0 932 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 B3GALT1Q9Y5Z6 326 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 ALG6Q9Y672 507 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 SCN8AQ9UQD0 1980 aa13.19□□□□□ -0.3
CPSF6-204ENST00000547486 AHCTF1Q8WYP5 2266 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 A0A0A6YYK5 440 aaPredicted RBP13.18□□□□□ -0.3
CPSF6-204ENST00000547486 LOC285095A0A1B0GVY8 99 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 CHUKO15111 745 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 SPOPO43791 374 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 MTX2O75431 263 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 NDST3O95803 873 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 F3P13726 295 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 CD82P27701 267 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 CSTF2P33240 577 aaKnown RBP eCLIP13.18□□□□□ -0.35e-7■□□□□ 8.4
CPSF6-204ENST00000547486 MAGEA1P43355 309 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 NR2C2P49116 596 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 DCDC1P59894 354 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 ODF2Q5BJF6 829 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 SNAP47Q5SQN1 464 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 KAZNQ674X7 775 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 WDR74Q6RFH5 385 aaPredicted RBP13.18□□□□□ -0.3
CPSF6-204ENST00000547486 KDELC1Q6UW63 502 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 CNGA4Q8IV77 575 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 TRAM1L1Q8N609 369 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 BMPERQ8N8U9 685 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 TC2NQ8N9U0 490 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 OR10G6Q8NH81 332 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 TFB1MQ8WVM0 346 aaKnown RBP13.18□□□□□ -0.3
CPSF6-204ENST00000547486 NCSTNQ92542 709 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 EXTL1Q92935 676 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 NKD1Q969G9 470 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 GLYATL1Q969I3 302 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 MED8Q96G25 268 aa13.18□□□□□ -0.3
CPSF6-204ENST00000547486 AHCYL2Q96HN2 611 aaKnown RBP13.18□□□□□ -0.3
CPSF6-204ENST00000547486 DPYSL5Q9BPU6 564 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms