RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 HCAR3P49019 387 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 CPT1AP50416 773 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 KCNQ1P51787 676 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 CHRNB3Q05901 458 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 TAF1CQ15572 869 aaPredicted RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 SCD5Q86SK9 330 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 EPHX4Q8IUS5 362 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 PELI3Q8N2H9 469 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 LZTR1Q8N653 840 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 TM6SF2Q9BZW4 377 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 TUBB1Q9H4B7 451 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 TREX1Q9NSU2 369 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 TMEM181Q9P2C4 612 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 CIDEBQ9UHD4 219 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 UPK3BL1B0FP48 263 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 UPK3BL2E5RIL1 263 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 TRIM24O15164 1050 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 XYLBO75191 536 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 LRATO95237 230 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 CLCN2P51788 898 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 MLLT6P55198 1093 aaPredicted RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 RPS24P62847 133 aaKnown RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 RPL38P63173 70 aaKnown RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 MRPS6P82932 125 aaKnown RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 HMGCS1Q01581 520 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 NR1D2Q14995 579 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 FAM45BPQ6NSW5 357 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 ZNF549Q6P9A3 640 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 TBPL2Q6SJ96 375 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 TICAM1Q8IUC6 712 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 STAG3L4Q8TBR4 150 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 FAM45AQ8TCE6 357 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 AURKBQ96GD4 344 aaPredicted RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 RBM38Q9H0Z9 239 aaKnown RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 TIMMDC1Q9NPL8 285 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 IFT80Q9P2H3 777 aaPredicted RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 RLFQ13129 1914 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 TNPO2O14787 897 aaKnown RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 STX7O15400 261 aaKnown RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 FGF10O15520 208 aaPredicted RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 BCL10O95999 233 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 CD1DP15813 335 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 FUT4P22083 530 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 TAF10Q12962 218 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 CARM1Q86X55 608 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 RNF168Q8IYW5 571 aaPredicted RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 OR10A6Q8NH74 314 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 TFAP2CQ92754 450 aa12.9□□□□□ -0.34
BRF1-210ENST00000547374 TRNAU1APQ9NX07 287 aaKnown RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 PNMA8BQ9ULN7 279 aaPredicted RBP12.9□□□□□ -0.34
BRF1-210ENST00000547374 ANK1P16157 1881 aa12.9□□□□□ -0.35
BRF1-210ENST00000547374 HHLA1C9JL84 531 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 DIRAS1O95057 198 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 C1RP00736 705 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 POLR2JP52435 117 aaKnown RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 AIF1P55008 147 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 APOFQ13790 326 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 IHHQ14623 411 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 RFTN1Q14699 578 aaPredicted RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 NHSL2Q5HYW2 709 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 ZNF280BQ86YH2 543 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 GPSM1Q86YR5 675 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 EEF1AKMT1Q8WVE0 214 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 ULK4Q96C45 1275 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 BIRC7Q96CA5 298 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 SERPINB11Q96P15 392 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 POLR1EQ9GZS1 481 aaKnown RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 ZNF385DQ9H6B1 395 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 PLGRKTQ9HBL7 147 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 FKBPLQ9UIM3 349 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 DOCK1Q14185 1865 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 MUSKO15146 869 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 ZNF682O95780 498 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 CAPN1P07384 714 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 HTR6P50406 440 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 IL5RAQ01344 420 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 SIM2Q14190 667 aaPredicted RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 MEP1AQ16819 746 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 PIWIL3Q7Z3Z3 882 aaKnown RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 PHACTR4Q8IZ21 702 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 KLHDC9Q8NEP7 349 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 ZC3H15Q8WU90 426 aaKnown RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 RTP3Q9BQQ7 232 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 CINPQ9BW66 212 aaPredicted RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 CCM2LQ9NUG4 571 aaPredicted RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 ASB1Q9Y576 335 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 RGPD3A6NKT7 1758 aaPredicted RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 RGPD4Q7Z3J3 1758 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 TCRBV3S1A0A5B6 114 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 C8BP07358 591 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 ZNF37AP17032 561 aaPredicted RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 LEPRP48357 1165 aaKnown RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 VAC14Q08AM6 782 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 PTGR1Q14914 329 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 CTXN3Q4LDR2 81 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 GDF6Q6KF10 455 aaPredicted RBP12.89□□□□□ -0.35
BRF1-210ENST00000547374 NANOGP8Q6NSW7 305 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 PPP4R4Q6NUP7 873 aa12.89□□□□□ -0.35
BRF1-210ENST00000547374 ANGPTL8Q6UXH0 198 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms