RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ANKRD36CQ5JPF3 1778 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 A0A0X1KG70 313 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 HTR3EA5X5Y0 456 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 C2orf71A6NGG8 1288 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 ACOX3O15254 700 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 LGR5O75473 907 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 DLDP09622 509 aaKnown RBP12.73□□□□□ -0.37
PTCH1-212ENST00000546744 GSTT2BP0CG30 244 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 XRCC1P18887 633 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-212ENST00000546744 SHMT1P34896 483 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 ATP4BP51164 291 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 PTGES3Q15185 160 aaKnown RBP12.73□□□□□ -0.37
PTCH1-212ENST00000546744 LLGL2Q6P1M3 1020 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF767PQ75MW2 155 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 KRT77Q7Z794 578 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-212ENST00000546744 METTL3Q86U44 580 aaKnown RBP12.73□□□□□ -0.37
PTCH1-212ENST00000546744 CEP41Q9BYV8 373 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 SLC6A15Q9H2J7 730 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 SIRPGQ9P1W8 387 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 OR12D3Q9UGF7 316 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 TRPS1Q9UHF7 1281 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 NFASCO94856 1347 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 FAM234BA2RU67 622 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 PTPN3P26045 913 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 CRATP43155 626 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 PTPN9P43378 593 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 SEMA5AQ13591 1074 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 FAM220AQ7Z4H9 259 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 RNASE11Q8TAA1 199 aaKnown RBP12.73□□□□□ -0.37
PTCH1-212ENST00000546744 CSGALNACT1Q8TDX6 532 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 PHOX2BQ99453 314 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 OMDQ99983 421 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 SMURF2Q9HAU4 748 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 B3GNT3Q9Y2A9 372 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 SPEF2Q9C093 1822 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 NHSQ6T4R5 1651 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 H7C4K7 107 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 I3L521 148 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 KHDRBS3O75525 346 aaKnown RBP12.72□□□□□ -0.37
PTCH1-212ENST00000546744 MSX2P35548 267 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-212ENST00000546744 KIR3DL1P43629 444 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 MYBPC1Q00872 1141 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 ORC1Q13415 861 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 SIM2Q14190 667 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-212ENST00000546744 GRIK5Q16478 980 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 HSD17B12Q53GQ0 312 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 KLHL22Q53GT1 634 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 TEX44Q53QW1 395 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 BRMS1LQ5PSV4 323 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 EIF5AL1Q6IS14 154 aaKnown RBP12.72□□□□□ -0.37
PTCH1-212ENST00000546744 SLC27A1Q6PCB7 646 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 LRRC52Q8N7C0 313 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 HEXDCQ8WVB3 486 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 GATA6Q92908 595 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 FBXO32Q969P5 355 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 CELF6Q96J87 481 aaKnown RBP12.72□□□□□ -0.37
PTCH1-212ENST00000546744 ABCC13Q9NSE7 274 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 A0A1W2PPW3 197 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 H3BNH8 94 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 DYRK3O43781 588 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 TYROBPO43914 113 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 HNRNPFP52597 415 aaKnown RBP12.72□□□□□ -0.37
PTCH1-212ENST00000546744 TBX4P57082 545 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 RHAGQ02094 409 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 OGFRL1Q5TC84 451 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-212ENST00000546744 SULT1C3Q6IMI6 304 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 KLHL35Q6PF15 583 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 SLC30A8Q8IWU4 369 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF557Q8N988 423 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-212ENST00000546744 C11orf65Q8NCR3 313 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 SLC7A6OSQ96CW6 309 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-212ENST00000546744 FRMD6Q96NE9 622 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 NECTIN3Q9NQS3 549 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 NFKBIL1Q9UBC1 381 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-212ENST00000546744 CLCA2Q9UQC9 943 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 CRYL1Q9Y2S2 319 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 DHRS7Q9Y394 339 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 PCDHB1Q9Y5F3 818 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 PRAMEF33A0A0G2JMD5 474 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 OR10H3O60404 316 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 PRAMEF10O60809 474 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
PTCH1-212ENST00000546744 TGFB2P61812 414 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 CRADDP78560 199 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 ATP13A5Q4VNC0 1218 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 PIK3R6Q5UE93 754 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 IL23RQ5VWK5 629 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 SAPCD2Q86UD0 394 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 SLC51AQ86UW1 340 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTCH1-212ENST00000546744 PJA1Q8NG27 643 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 ATG4CQ96DT6 458 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 ASB3Q9Y575 518 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 WNK3Q9BYP7 1800 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 ARPC4-TTLL3A0A0A6YYG9 625 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 MEIS2O14770 477 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 PGLSO95336 258 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 PTTG1O95997 202 aa12.72□□□□□ -0.37
PTCH1-212ENST00000546744 HPRP00739 348 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 387.2 ms