RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 COX4I2Q96KJ9 171 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 SNX27Q96L92 541 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 ZNF560Q96MR9 790 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 RPRD1AQ96P16 312 aaPredicted RBP14.58□□□□□ -0.08
HOXC11-202ENST00000546378 GPR78Q96P69 363 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 NPLQ9BXD5 320 aaPredicted RBP14.58□□□□□ -0.08
HOXC11-202ENST00000546378 C6orf62Q9GZU0 229 aaPredicted RBP14.58□□□□□ -0.08
HOXC11-202ENST00000546378 VPS45Q9NRW7 570 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 INIPQ9NRY2 104 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 MAP10Q9P2G4 905 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 EIF2B4Q9UI10 523 aaKnown RBP14.58□□□□□ -0.08
HOXC11-202ENST00000546378 ANAPC2Q9UJX6 822 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 ADAM28Q9UKQ2 775 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 BLOC1S6Q9UL45 172 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 IPPQ9Y573 584 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 LOC100506127A0A0U1RQW1 187 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 AZIN1O14977 448 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 OR4F21O95013 312 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 DLGAP3O95886 979 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 SHMT2P34897 504 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 HALP42357 657 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 DAOAP59103 153 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 PURAQ00577 322 aaKnown RBP14.58□□□□□ -0.08
HOXC11-202ENST00000546378 SELPLGQ14242 412 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 SYT16Q17RD7 645 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 RGS21Q2M5E4 152 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 FAM214AQ32MH5 1076 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 RAP1GAP2Q684P5 730 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 PAQR3Q6TCH7 311 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 CRTC3Q6UUV7 619 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 IL27RAQ6UWB1 636 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 CLEC14AQ86T13 490 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 ADCK1Q86TW2 530 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 CARM1Q86X55 608 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 UBE2J2Q8N2K1 259 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 OR10A6Q8NH74 314 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 FAM162AQ96A26 154 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 LRRC58Q96CX6 371 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 NSMCE2Q96MF7 247 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 PPP1R10Q96QC0 940 aaKnown RBP14.58□□□□□ -0.08
HOXC11-202ENST00000546378 EGFL8Q99944 293 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 SMPD3Q9NY59 655 aaPredicted RBP14.58□□□□□ -0.08
HOXC11-202ENST00000546378 SNX5Q9Y5X3 404 aa14.58□□□□□ -0.08
HOXC11-202ENST00000546378 ZNF638Q14966 1978 aaKnown RBP14.57□□□□□ -0.08
HOXC11-202ENST00000546378 INMTO95050 263 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 FADS2O95864 444 aaKnown RBP14.57□□□□□ -0.08
HOXC11-202ENST00000546378 ASGR1P07306 291 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 GRK4P32298 578 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 TPTEP56180 551 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 OR4D1Q15615 310 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 SLCO6A1Q86UG4 719 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 FBXO39Q8N4B4 442 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 C3orf58Q8NDZ4 430 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 C7orf57Q8NEG2 295 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 ZNF597Q96LX8 424 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 SEMA3CQ99985 751 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 LHPPQ9H008 270 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 TCAF1Q9Y4C2 921 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 LSM1O15116 133 aaKnown RBP14.57□□□□□ -0.08
HOXC11-202ENST00000546378 CDK14O94921 469 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 TCF3P15923 654 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 ALOX15P16050 662 aaPredicted RBP14.57□□□□□ -0.08
HOXC11-202ENST00000546378 OPRL1P41146 370 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 MTHFRP42898 656 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 TM4SF4P48230 202 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 MLLT10P55197 1068 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 HMGCS1Q01581 520 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 RELAQ04206 551 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 VAC14Q08AM6 782 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 SNX17Q15036 470 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 KCNA10Q16322 511 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 GTDC1Q4AE62 458 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 ERMP1Q7Z2K6 904 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 ITFG1Q8TB96 612 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 FRS2Q8WU20 508 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 TFAP2CQ92754 450 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 WDR6Q9NNW5 1121 aaKnown RBP14.57□□□□□ -0.08
HOXC11-202ENST00000546378 FBXW11Q9UKB1 542 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 POU2F3Q9UKI9 436 aa14.57□□□□□ -0.08
HOXC11-202ENST00000546378 AAR2Q9Y312 384 aaKnown RBP14.57□□□□□ -0.08
HOXC11-202ENST00000546378 ARID1BQ8NFD5 2236 aaPredicted RBP14.57□□□□□ -0.08
HOXC11-202ENST00000546378 E5RI56 91 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 OR1I1O60431 355 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 MITFO75030 526 aaPredicted RBP14.56□□□□□ -0.08
HOXC11-202ENST00000546378 DUSP11O75319 330 aaKnown RBP14.56□□□□□ -0.08
HOXC11-202ENST00000546378 MAGEA6P43360 314 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 PCYT1AP49585 367 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 ZBED5Q49AG3 693 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 ARMC12Q5T9G4 340 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 SYTL1Q8IYJ3 562 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 ZBTB8BQ8NAP8 495 aaPredicted RBP14.56□□□□□ -0.08
HOXC11-202ENST00000546378 SMAD5Q99717 465 aaKnown RBP14.56□□□□□ -0.08
HOXC11-202ENST00000546378 HGH1Q9BTY7 390 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 SH3PXD2BA1X283 911 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 NADKO95544 446 aaPredicted RBP14.56□□□□□ -0.08
HOXC11-202ENST00000546378 IMPDH2P12268 514 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 SLC2A4P14672 509 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 DARSP14868 501 aaKnown RBP14.56□□□□□ -0.08
HOXC11-202ENST00000546378 PRDX6P30041 224 aa14.56□□□□□ -0.08
HOXC11-202ENST00000546378 DDX39BQ13838 428 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms