RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 GNPTGQ9UJJ9 305 aa19.3■□□□□ 0.68
SKP2-208ENST00000546211 FAM50BQ9Y247 325 aa19.3■□□□□ 0.68
SKP2-208ENST00000546211 E5RI56 91 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 AREL1O15033 823 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 WISP3O95389 354 aaPredicted RBP19.29■□□□□ 0.68
SKP2-208ENST00000546211 CPA3P15088 417 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 CD9P21926 228 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 P2RY2P41231 377 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 GLRBP48167 497 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 LIG3P49916 1009 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 DLG1Q12959 904 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 CST6Q15828 149 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 ZNF284Q2VY69 593 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 ATP13A5Q4VNC0 1218 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 CTSL3PQ5NE16 218 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 ATG16L1Q676U5 607 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 PTRHD1Q6GMV3 140 aaKnown RBP19.29■□□□□ 0.68
SKP2-208ENST00000546211 NRSN1Q8IZ57 195 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 HEXDCQ8WVB3 486 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 SREK1Q8WXA9 508 aaKnown RBP19.29■□□□□ 0.68
SKP2-208ENST00000546211 KCNJ9Q92806 393 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 UBXN10Q96LJ8 280 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 IGSF5Q9NSI5 407 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 FGFR1OP2Q9NVK5 253 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 ZDHHC3Q9NYG2 299 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 BRWD1Q9NSI6 2320 aa19.29■□□□□ 0.68
SKP2-208ENST00000546211 PLK4O00444 970 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 KLF11O14901 512 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 WNT9AO14904 365 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 SPINT1O43278 529 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 NARSO43776 548 aaKnown RBP19.28■□□□□ 0.68
SKP2-208ENST00000546211 CHRM3P20309 590 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 ALDH3A1P30838 453 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 CA5AP35218 305 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 MRPS21P82921 87 aaKnown RBP19.28■□□□□ 0.68
SKP2-208ENST00000546211 TIAL1Q01085 375 aaKnown RBP eCLIP19.28■□□□□ 0.68
SKP2-208ENST00000546211 CCDC15Q0P6D6 951 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 CNTN1Q12860 1018 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 PCLAFQ15004 111 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 CHI3L2Q15782 390 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 PUS10Q3MIT2 529 aaKnown RBP19.28■□□□□ 0.68
SKP2-208ENST00000546211 TMEM52BQ4KMG9 183 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 ZNF776Q68DI1 518 aaPredicted RBP19.28■□□□□ 0.68
SKP2-208ENST00000546211 UGT3A1Q6NUS8 523 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 FAM47EQ6ZV65 393 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 TECPR1Q7Z6L1 1165 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 FSTL5Q8N475 847 aaPredicted RBP19.28■□□□□ 0.68
SKP2-208ENST00000546211 SPATA6LQ8N4H0 392 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 TRAM1L1Q8N609 369 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 DEFB123Q8N688 67 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 IL17RCQ8NAC3 791 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 OR2T3Q8NH03 318 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 PPP1R14CQ8TAE6 165 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 GPR78Q96P69 363 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 COPS8Q99627 209 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 ZSCAN5AQ9BUG6 496 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 PITPNM3Q9BZ71 974 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 FBRSQ9HAH7 460 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 TRMT6Q9UJA5 497 aaKnown RBP19.28■□□□□ 0.68
SKP2-208ENST00000546211 BPTFQ12830 3046 aa19.28■□□□□ 0.68
SKP2-208ENST00000546211 H3BMM5 538 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 MID1O15344 667 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 NIPSNAP2O75323 286 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 KLF8O95600 359 aaPredicted RBP19.27■□□□□ 0.68
SKP2-208ENST00000546211 MYL2P10916 166 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 SRFP11831 508 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 ZNF37AP17032 561 aaPredicted RBP19.27■□□□□ 0.68
SKP2-208ENST00000546211 C5AR1P21730 350 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 SKIV2L2P42285 1042 aaKnown RBP19.27■□□□□ 0.68
SKP2-208ENST00000546211 NSG1P42857 185 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 TDGQ13569 410 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 ACAP2Q15057 778 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 TMEM207Q6UWW9 146 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 CXorf40AQ8TE69 158 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 ANKRD49Q8WVL7 239 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 SCAMP4Q969E2 229 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 FAM136AQ96C01 138 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 COQ10AQ96MF6 247 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 GPR21Q99679 349 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 MRPL57Q9BQC6 102 aaKnown RBP19.27■□□□□ 0.68
SKP2-208ENST00000546211 RIOK2Q9BVS4 552 aaKnown RBP19.27■□□□□ 0.68
SKP2-208ENST00000546211 BOCQ9BWV1 1114 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 MRPL46Q9H2W6 279 aaKnown RBP19.27■□□□□ 0.68
SKP2-208ENST00000546211 SLC2A4RGQ9NR83 387 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 SMOXQ9NWM0 555 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 CPSF2Q9P2I0 782 aaKnown RBP19.27■□□□□ 0.68
SKP2-208ENST00000546211 XPR1Q9UBH6 696 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 OAS3Q9Y6K5 1087 aaKnown RBP19.27■□□□□ 0.68
SKP2-208ENST00000546211 XIRP2A4UGR9 3374 aa19.27■□□□□ 0.68
SKP2-208ENST00000546211 RBP1P09455 135 aa19.27■□□□□ 0.67
SKP2-208ENST00000546211 HOXB2P14652 356 aa19.27■□□□□ 0.67
SKP2-208ENST00000546211 KCNA4P22459 653 aa19.27■□□□□ 0.67
SKP2-208ENST00000546211 FBXO43Q4G163 708 aa19.27■□□□□ 0.67
SKP2-208ENST00000546211 HENMT1Q5T8I9 393 aaKnown RBP19.27■□□□□ 0.67
SKP2-208ENST00000546211 GKAP1Q5VSY0 366 aaPredicted RBP19.27■□□□□ 0.67
SKP2-208ENST00000546211 CYP2U1Q7Z449 544 aa19.27■□□□□ 0.67
SKP2-208ENST00000546211 CACUL1Q86Y37 369 aa19.27■□□□□ 0.67
SKP2-208ENST00000546211 C10orf107Q8IVU9 208 aa19.27■□□□□ 0.67
SKP2-208ENST00000546211 TXNDC5Q8NBS9 432 aaKnown RBP19.27■□□□□ 0.67
SKP2-208ENST00000546211 FAM3CQ92520 227 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms