RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 DMXL2Q8TDJ6 3036 aa7.69□□□□□ -1.18
SNHG1-223ENST00000545440 PIKFYVEQ9Y2I7 2098 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 LY6G6EA0A0G2JKS1 128 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 LRRD1A4D1F6 860 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 FAM149AA5PLN7 773 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 SRRM3A6NNA2 597 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-223ENST00000545440 LMO7DNF2Z398 122 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 PSMD11O00231 422 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 CLEC3AO75596 197 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 NEBLO76041 1014 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 RECQL5O94762 991 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-223ENST00000545440 RASGRP1O95267 797 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 PGLSO95336 258 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 LCA5LO95447 670 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 PRKCGP05129 697 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 PCCBP05166 539 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 CYP2A6P11509 494 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-223ENST00000545440 KDELR1P24390 212 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 CCNCP24863 283 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 VIPR1P32241 457 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 SLC1A1P43005 524 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 DUSP3P51452 185 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-223ENST00000545440 HK3P52790 923 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 KIAA1024LP59773 190 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 MAXP61244 160 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 RNF4P78317 190 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 PPARDQ03181 441 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 TRAF2Q12933 501 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 MESDQ14696 234 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 CNGA3Q16281 694 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 ATP13A4Q4VNC1 1196 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 ZFYVE27Q5T4F4 411 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 LRRC38Q5VT99 294 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 LIPIQ6XZB0 460 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 USP45Q70EL2 814 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 RBFAQ8N0V3 343 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 SDR16C5Q8N3Y7 309 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 FSTL5Q8N475 847 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-223ENST00000545440 PQLC3Q8N755 202 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 DCBLD1Q8N8Z6 715 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 TC2NQ8N9U0 490 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 PDCD6IPQ8WUM4 868 aaKnown RBP7.68□□□□□ -1.18
SNHG1-223ENST00000545440 HNRNPLLQ8WVV9 542 aaKnown RBP7.68□□□□□ -1.18
SNHG1-223ENST00000545440 MEGF10Q96KG7 1140 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 WDR92Q96MX6 357 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 MCCC1Q96RQ3 725 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-223ENST00000545440 IL12RB2Q99665 862 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 SEMA3CQ99985 751 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 BOCQ9BWV1 1114 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 TRIM5Q9C035 493 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 NOD2Q9HC29 1040 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 B4GALT6Q9UBX8 382 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 PNMA8BQ9ULN7 279 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-223ENST00000545440 PHTF1Q9UMS5 762 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 CLCA2Q9UQC9 943 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 RAXQ9Y2V3 346 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 DGKBQ9Y6T7 804 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 U3KQA8 63 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 PTPRQQ9UMZ3 2332 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 CELSR3Q9NYQ7 3312 aa7.68□□□□□ -1.18
SNHG1-223ENST00000545440 CFAP47Q6ZTR5 3102 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 NPIPB15A6NHN6 443 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-223ENST00000545440 C3orf70A6NLC5 250 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-223ENST00000545440 CACNB4O00305 520 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-223ENST00000545440 TNFRSF10CO14798 259 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 RGS13O14921 159 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 MATN3O15232 486 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 GSC2O15499 205 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 PSTPIP1O43586 416 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 KRT37O76014 449 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 HEXIM1O94992 359 aaKnown RBP7.67□□□□□ -1.18
SNHG1-223ENST00000545440 HOXC4P09017 264 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-223ENST00000545440 ALPIP09923 528 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 MYCLP1P12525 358 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-223ENST00000545440 KRT10P13645 584 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 CCNB1P14635 433 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 JUPP14923 745 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 TSHRP16473 764 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 GM2AP17900 193 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 CA4P22748 312 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 LHCGRP22888 699 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 KELP23276 732 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 HADHBP55084 474 aaKnown RBP7.67□□□□□ -1.18
SNHG1-223ENST00000545440 SEMG2Q02383 582 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 GBE1Q04446 702 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 PPIDQ08752 370 aaKnown RBP7.67□□□□□ -1.18
SNHG1-223ENST00000545440 SLBPQ14493 270 aaKnown RBP eCLIP7.67□□□□□ -1.182e-8■□□□□ 9.6
SNHG1-223ENST00000545440 ACOX1Q15067 660 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 ELOCQ15369 112 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 ALG11Q2TAA5 492 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 DEFB133Q30KQ1 61 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 CYP27C1Q4G0S4 372 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 ARMC12Q5T9G4 340 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 FAXCQ5TGI0 409 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 SLC9A4Q6AI14 798 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 LVRNQ6Q4G3 990 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 CD163Q86VB7 1156 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 RHOT1Q8IXI2 618 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 CCDC13Q8IYE1 715 aa7.67□□□□□ -1.18
SNHG1-223ENST00000545440 NDUFAF2Q8N183 169 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms