RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ACAP2Q15057 778 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 TSNAXIP1Q2TAA8 658 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 KLC3Q6P597 504 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 PARM1Q6UWI2 310 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 HSD11B1LQ7Z5J1 315 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 PELI3Q8N2H9 469 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 PTGR2Q8N8N7 351 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-202ENST00000544223 LEMD2Q8NC56 503 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 GABPB2Q8TAK5 448 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-202ENST00000544223 CHFRQ96EP1 664 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 MYADMQ96S97 322 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 MIPEPQ99797 713 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 PLCD4Q9BRC7 762 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 WRAP53Q9BUR4 548 aaKnown RBP13.57□□□□□ -0.24
HCFC2-202ENST00000544223 ILKAPQ9H0C8 392 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-202ENST00000544223 ACTR5Q9H9F9 607 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-202ENST00000544223 INTS10Q9NVR2 710 aaKnown RBP13.57□□□□□ -0.24
HCFC2-202ENST00000544223 GIMAP2Q9UG22 337 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 FRYLO94915 3013 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 LOC100653049A0A140TA62 436 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-202ENST00000544223 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-202ENST00000544223 ATP6AP2A0A1C7CYW4 349 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 SUPT3HB4E1H0 165 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 SOCS5O75159 536 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 SUPT3HO75486 399 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 ATP6AP2O75787 350 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 KRT34O76011 436 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 PFKLP17858 780 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 ATP5F1P24539 256 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-202ENST00000544223 RECQLP46063 649 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-202ENST00000544223 Q6ZVL8 140 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 ASRGL1Q7L266 308 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 PBXIP1Q96AQ6 731 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 ECHDC3Q96DC8 303 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 WWP1Q9H0M0 922 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 PCDH12Q9NPG4 1184 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 MSRAQ9UJ68 235 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 CRLS1Q9UJA2 301 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 TMPRSS11EQ9UL52 423 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 NUP210Q8TEM1 1887 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-202ENST00000544223 NUMA1Q14980 2115 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 KPNA3O00505 521 aaPredicted RBP13.56□□□□□ -0.24
HCFC2-202ENST00000544223 DCXO43602 365 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 HK3P52790 923 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 FOXA1P55317 472 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 CCDC15Q0P6D6 951 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 SPDYAQ5MJ70 313 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 NXNQ6DKJ4 435 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 GALNT7Q86SF2 657 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 STK40Q8N2I9 435 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 PCDH20Q8N6Y1 951 aaKnown RBP13.56□□□□□ -0.24
HCFC2-202ENST00000544223 BEND7Q8N7W2 519 aaPredicted RBP13.56□□□□□ -0.24
HCFC2-202ENST00000544223 ZNF398Q8TD17 642 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 SLC45A3Q96JT2 553 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 ELOVL2Q9NXB9 296 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 HACD3Q9P035 362 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 RIMKLBQ9ULI2 386 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 PLXNB3Q9ULL4 1909 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 ECI2O75521 394 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 APOA4P06727 396 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 GFAPP14136 432 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 NQO1P15559 274 aaKnown RBP13.56□□□□□ -0.24
HCFC2-202ENST00000544223 PRDX3P30048 256 aaKnown RBP13.56□□□□□ -0.24
HCFC2-202ENST00000544223 CSNK1DP48730 415 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 POLD2P49005 469 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 RPL14P50914 215 aaKnown RBP13.56□□□□□ -0.24
HCFC2-202ENST00000544223 CLCN7P51798 805 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 PRKAA2P54646 552 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 B4GALNT1Q00973 533 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 PPP1R3AQ16821 1122 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 FNDC3BQ53EP0 1204 aaKnown RBP13.56□□□□□ -0.24
HCFC2-202ENST00000544223 PTRHD1Q6GMV3 140 aaKnown RBP13.56□□□□□ -0.24
HCFC2-202ENST00000544223 LMNTD2Q8IXW0 634 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 PTCD3Q96EY7 689 aaKnown RBP13.56□□□□□ -0.24
HCFC2-202ENST00000544223 FAM83CQ9BQN1 747 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 P2RY12Q9H244 342 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 TRMT6Q9UJA5 497 aaKnown RBP13.56□□□□□ -0.24
HCFC2-202ENST00000544223 RNF112Q9ULX5 631 aa13.56□□□□□ -0.24
HCFC2-202ENST00000544223 H7C0S8 307 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 DNAJC8O75937 253 aaPredicted RBP13.55□□□□□ -0.24
HCFC2-202ENST00000544223 SLC25A14O95258 325 aaPredicted RBP13.55□□□□□ -0.24
HCFC2-202ENST00000544223 GUCA1CO95843 209 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 ADH1CP00326 375 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 KHDC1Q4VXA5 237 aaKnown RBP13.55□□□□□ -0.24
HCFC2-202ENST00000544223 TPRG1Q6ZUI0 275 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 USP45Q70EL2 814 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 ETFBKMTQ8IXQ9 262 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 EFCAB3Q8N7B9 438 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 GBP7Q8N8V2 638 aaPredicted RBP13.55□□□□□ -0.24
HCFC2-202ENST00000544223 KDM1BQ8NB78 822 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 RDH11Q8TC12 318 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 ABHD8Q96I13 439 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 ATOH8Q96SQ7 321 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 HEPHQ9BQS7 1158 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 TBC1D10AQ9BXI6 508 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 GSTO2Q9H4Y5 243 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 SEMA4BQ9NPR2 832 aaPredicted RBP13.55□□□□□ -0.24
HCFC2-202ENST00000544223 CACNA2D2Q9NY47 1150 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 MARK1Q9P0L2 795 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms