RNA–Protein interactions for RNA: ENST00000544041.5

MAP3K4-215, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 1 (best)

Gene MAP3K4, Length 5,444 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-215ENST00000544041 SHROOM1Q2M3G4 852 aaPredicted RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 MACC1Q6ZN28 852 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 RBFAQ8N0V3 343 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 OR5K1Q8NHB7 308 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 ZNF516Q92618 1163 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 TMEM169Q96HH4 297 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 CCDC106Q9BWC9 280 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 ZBTB26Q9HCK0 441 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 TMED5Q9Y3A6 229 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 MFHAS1Q9Y4C4 1052 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 DUOX1Q9NRD9 1551 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 UBE2QL1A1L167 161 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 PDLIM1O00151 329 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 PLOD3O60568 738 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 LRG1P02750 347 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 CDH1P12830 882 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 TUBA3CQ13748 450 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 TMPRSS11AQ6ZMR5 421 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 TRMT11Q7Z4G4 463 aaKnown RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 SMG8Q8ND04 991 aaKnown RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 IPCEF1Q8WWN9 437 aaPredicted RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 GLT1D1Q96MS3 346 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 CHCHD6Q9BRQ6 235 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 SLC25A51Q9H1U9 297 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 AGO3Q9H9G7 860 aaKnown RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 SNX7Q9UNH6 387 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 SLC7A4O43246 635 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 TBX1O43435 398 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 GJB1P08034 283 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 MC4RP32245 332 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 GPD2P43304 727 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 EN1Q05925 392 aaPredicted RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 GALNT3Q14435 633 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 TSTD2Q5T7W7 516 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 THOC7Q6I9Y2 204 aaKnown RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 USP45Q70EL2 814 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 TRPV3Q8NET8 790 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 COPS5Q92905 334 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 PGLYRP2Q96PD5 576 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 FEM1AQ9BSK4 669 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 MAF1Q9H063 256 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 RPLP0P05388 317 aaKnown RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 ASPAP45381 313 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 POLR2LP62875 67 aaKnown RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 CDCA2Q69YH5 1023 aaPredicted RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 PYROXD2Q8N2H3 581 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 TTC29Q8NA56 475 aaPredicted RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 TSSK3Q96PN8 268 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 NUDT4Q9NZJ9 180 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 WRAP73Q9P2S5 460 aaPredicted RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 SLC9A8Q9Y2E8 581 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 CARD8Q9Y2G2 431 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 MAFBQ9Y5Q3 323 aaPredicted RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 STX16-NPEPL1H3BU86 382 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 OR6B1O95007 311 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 PSEN2P49810 448 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 IRF9Q00978 393 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 FOXM1Q08050 763 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 ARHGAP15Q53QZ3 475 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 USP43Q70EL4 1123 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 MRPS7Q9Y2R9 242 aaKnown RBP13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 TRPV2Q9Y5S1 764 aa13.61□□□□□ -0.23
MAP3K4-215ENST00000544041 ARPC2O15144 300 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 MPZL2O60487 215 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 CLPXO76031 633 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 LRATO95237 230 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 PIGRP01833 764 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 ALDH2P05091 517 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 CYP2A6P11509 494 aaPredicted RBP13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 RPL9P32969 192 aaKnown RBP13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 SDC2P34741 201 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 HNF4AP41235 474 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 ENTPD1P49961 510 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 SLC25A11Q02978 314 aaKnown RBP13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 IQSEC1Q6DN90 963 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 CNSTQ6PJW8 725 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 GATAD2AQ86YP4 633 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 DENND6AQ8IWF6 608 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 GLB1L3Q8NCI6 653 aaPredicted RBP13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 STYXQ8WUJ0 223 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 BORCS6Q96GS4 357 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 DIRAS2Q96HU8 199 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 MIPEPQ99797 713 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 C2orf49Q9BVC5 232 aaPredicted RBP13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 FZD10Q9ULW2 581 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 PCDHB1Q9Y5F3 818 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 FAM234BA2RU67 622 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 ATP5C1P36542 298 aaKnown RBP13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 CAPZA2P47755 286 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 RFX3P48380 749 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 MVKQ03426 396 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 TNFAIP8L3Q5GJ75 292 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 KLHL5Q96PQ7 755 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 TPK1Q9H3S4 243 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 ACTR3BQ9P1U1 418 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 ZNF490Q9ULM2 529 aaPredicted RBP13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 KCNH4Q9UQ05 1017 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 MYH8P13535 1937 aa13.6□□□□□ -0.23
MAP3K4-215ENST00000544041 EFCAB9A8MZ26 197 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms