RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ERVK-5Q9HDB9 667 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 YDJCA8MPS7 323 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 C1QTNF3-AMACRE9PGA6 284 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 DHX15O43143 795 aaKnown RBP15.37■□□□□ 0.05
CHD4-210ENST00000544040 ERBB2P04626 1255 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 PRKCIP41743 596 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 SMARCD3Q6STE5 483 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 ZZZ3Q8IYH5 903 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 OR5T3Q8NGG3 340 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 HM13Q8TCT9 377 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 SPOCK2Q92563 424 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 PRDM16Q9HAZ2 1276 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 LRTM1Q9HBL6 345 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 IFT46Q9NQC8 304 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 MARK1Q9P0L2 795 aa15.37■□□□□ 0.05
CHD4-210ENST00000544040 AIREO43918 545 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 UROSP10746 265 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 KCNA5P22460 613 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 CDK18Q07002 472 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 GFOD2Q3B7J2 385 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 GCNT6Q5T4J0 391 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 CHSY3Q70JA7 882 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 CBR4Q8N4T8 237 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 HELQQ8TDG4 1101 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 PNPLA8Q9NP80 782 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 TRBV23OR9-2A0A075B6M9 112 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 LRRC38Q5VT99 294 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 INTS5Q6P9B9 1019 aaKnown RBP15.36■□□□□ 0.05
CHD4-210ENST00000544040 LINGO2Q7L985 606 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 UNC93AQ86WB7 457 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 HJURPQ8NCD3 748 aaPredicted RBP15.36■□□□□ 0.05
CHD4-210ENST00000544040 LRRC20Q8TCA0 184 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 EXOSC8Q96B26 276 aaKnown RBP15.36■□□□□ 0.05
CHD4-210ENST00000544040 RAB26Q9ULW5 256 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 SLC30A4O14863 429 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 KDM4BO94953 1096 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 GJB1P08034 283 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 SLC1A5Q15758 541 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 SLC9A4Q6AI14 798 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 RBFAQ8N0V3 343 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 LSM14AQ8ND56 463 aaKnown RBP15.36■□□□□ 0.05
CHD4-210ENST00000544040 NOBOXO60393 691 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 SNX4O95219 450 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 MATN4O95460 622 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 ACTR3P61158 418 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 PRAMEF19Q5SWL8 479 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 KCTD8Q6ZWB6 473 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 SNX20Q7Z614 316 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 SH3RF1Q7Z6J0 888 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 FAM129CQ86XR2 697 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 P2RY11Q96G91 374 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 EBPLQ9BY08 206 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 ADCY10Q96PN6 1610 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 H3BNH8 94 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 PLK4O00444 970 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 CYP2C18P33260 490 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 CCR10P46092 362 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 WNT3AP56704 352 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 ECT2LQ008S8 904 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 ZNF155Q12901 538 aaPredicted RBP15.36■□□□□ 0.05
CHD4-210ENST00000544040 PABPC1LQ4VXU2 614 aaKnown RBP15.36■□□□□ 0.05
CHD4-210ENST00000544040 IDNKQ5T6J7 187 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 C9orf131Q5VYM1 1079 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 CLNKQ7Z7G1 428 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 P2RY8Q86VZ1 359 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 ZNF570Q96NI8 536 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 CCDC28BQ9BUN5 200 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 GPN3Q9UHW5 284 aaPredicted RBP15.36■□□□□ 0.05
CHD4-210ENST00000544040 PLLPQ9Y342 182 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 NEXMIFQ5QGS0 1516 aa15.36■□□□□ 0.05
CHD4-210ENST00000544040 PTPRAP18433 802 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 EFNA1P20827 205 aaPredicted RBP15.35■□□□□ 0.05
CHD4-210ENST00000544040 PTGS2P35354 604 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 MAGEA2P43356 314 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 GRSF1Q12849 480 aaKnown RBP eCLIP15.35■□□□□ 0.05
CHD4-210ENST00000544040 GPR158Q5T848 1215 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 GHDCQ8N2G8 530 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 INTS10Q9NVR2 710 aaKnown RBP15.35■□□□□ 0.05
CHD4-210ENST00000544040 SMPD3Q9NY59 655 aaPredicted RBP15.35■□□□□ 0.05
CHD4-210ENST00000544040 SPATA31A1Q5TZJ5 1347 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 ALOX15BO15296 676 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 ELFN1P0C7U0 828 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 IGFBP4P22692 258 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 PPIBP23284 216 aaKnown RBP15.35■□□□□ 0.05
CHD4-210ENST00000544040 C2orf80Q0P641 193 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 UBR7Q8N806 425 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 OR5B17Q8NGF7 314 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 TESMINQ9Y4I5 508 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 CLUHO75153 1309 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 CASZ1Q86V15 1759 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 AKR1A1P14550 325 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 DEFA5Q01523 94 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 RUNDC3AQ59EK9 446 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 NXF3Q9H4D5 531 aaKnown RBP15.35■□□□□ 0.05
CHD4-210ENST00000544040 MSI1O43347 362 aaKnown RBP15.35■□□□□ 0.05
CHD4-210ENST00000544040 SPATA31D3P0C874 917 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 PSKH1P11801 424 aa15.35■□□□□ 0.05
CHD4-210ENST00000544040 RPS9P46781 194 aaKnown RBP15.35■□□□□ 0.05
CHD4-210ENST00000544040 NOMO3P69849 1222 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms