RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SNX20Q7Z614 316 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 PHYKPLQ8IUZ5 450 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 OXR1Q8N573 874 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 MINDY1Q8N5J2 469 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 OR56A4Q8NGH8 313 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 OR6P1Q8NGX9 317 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 GDAP1Q8TB36 358 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 FBXO25Q8TCJ0 367 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 TSACCQ96A04 125 aaPredicted RBP13.51□□□□□ -0.25
SP140-213ENST00000543928 ZNF669Q96BR6 464 aaPredicted RBP13.51□□□□□ -0.25
SP140-213ENST00000543928 FAM122AQ96E09 287 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 STAMBPL1Q96FJ0 436 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 ELF4Q99607 663 aaPredicted RBP13.51□□□□□ -0.25
SP140-213ENST00000543928 EDEM2Q9BV94 578 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 FAM96AQ9H5X1 160 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 CAAP1Q9H8G2 361 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 FGF22Q9HCT0 170 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 MRPL40Q9NQ50 206 aaKnown RBP13.51□□□□□ -0.25
SP140-213ENST00000543928 FAM114A2Q9NRY5 505 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 SMOXQ9NWM0 555 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 DNAJC28Q9NX36 388 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 CRLS1Q9UJA2 301 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 MOSPD1Q9UJG1 213 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 PNMA8BQ9ULN7 279 aaPredicted RBP13.51□□□□□ -0.25
SP140-213ENST00000543928 OAS3Q9Y6K5 1087 aaKnown RBP13.51□□□□□ -0.25
SP140-213ENST00000543928 A0A1B0GTQ1 180 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 TNFRSF10CO14798 259 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 GOT2P00505 430 aaKnown RBP13.5□□□□□ -0.25
SP140-213ENST00000543928 CEACAM5P06731 702 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 RHOXF2BP0C7M4 288 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 PRSS56P0CW18 603 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 NME1P15531 152 aaKnown RBP13.5□□□□□ -0.25
SP140-213ENST00000543928 PGAM1P18669 254 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 PLA2G5P39877 138 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 ARRB1P49407 418 aaPredicted RBP13.5□□□□□ -0.25
SP140-213ENST00000543928 CDKN1CP49918 316 aaPredicted RBP13.5□□□□□ -0.25
SP140-213ENST00000543928 SRP54P61011 504 aaKnown RBP13.5□□□□□ -0.25
SP140-213ENST00000543928 PPARDQ03181 441 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 CACNG1Q06432 222 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 PDIA2Q13087 525 aaKnown RBP13.5□□□□□ -0.25
SP140-213ENST00000543928 HP1BP3Q5SSJ5 553 aaPredicted RBP13.5□□□□□ -0.25
SP140-213ENST00000543928 ZNF648Q5T619 568 aaPredicted RBP13.5□□□□□ -0.25
SP140-213ENST00000543928 GPRC6AQ5T6X5 926 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 AFTPHQ6ULP2 937 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 RD3Q7Z3Z2 195 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 TMEM135Q86UB9 458 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 HID1Q8IV36 788 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 IGDCC3Q8IVU1 814 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 OR1E3Q8WZA6 343 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 ULK4Q96C45 1275 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 PDXPQ96GD0 296 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 FCRL3Q96P31 734 aaPredicted RBP13.5□□□□□ -0.25
SP140-213ENST00000543928 EBNA1BP2Q99848 306 aaKnown RBP13.5□□□□□ -0.25
SP140-213ENST00000543928 RHOXF2Q9BQY4 288 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 KLF15Q9UIH9 416 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 SLC17A4Q9Y2C5 497 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 RPS6KL1Q9Y6S9 549 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 LAMA1P25391 3075 aa13.5□□□□□ -0.25
SP140-213ENST00000543928 ZNF292O60281 2723 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 PRSS38A1L453 326 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 AGAP14A8MT82 685 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 E7ESA3 106 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 H3BM21 787 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 CDX4O14627 284 aaPredicted RBP13.49□□□□□ -0.25
SP140-213ENST00000543928 GDF9O60383 454 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 DFNA5O60443 496 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 SDC3O75056 442 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 MTX2O75431 263 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 RASGRP1O95267 797 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 CSF2P04141 144 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 JUNDP17535 347 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 PAMP19021 973 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 FOXN2P32314 431 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 ELK3P41970 407 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 RXRGP48443 463 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 CCT8P50990 548 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 IL9RQ01113 521 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 SHBQ15464 509 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 GPR33Q49SQ1 333 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 ANKRD20A4Q4UJ75 823 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 KHDC1Q4VXA5 237 aaKnown RBP13.49□□□□□ -0.25
SP140-213ENST00000543928 LDLRAP1Q5SW96 308 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 TEX35Q5T0J7 233 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 KIAA0930Q6ICG6 404 aaPredicted RBP13.49□□□□□ -0.25
SP140-213ENST00000543928 PSAPL1Q6NUJ1 521 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 CENPUQ71F23 418 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 MARK2Q7KZI7 788 aaKnown RBP13.49□□□□□ -0.25
SP140-213ENST00000543928 TAS2R42Q7RTR8 314 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 PIANPQ8IYJ0 282 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 KIAA2013Q8IYS2 634 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 PHACTR4Q8IZ21 702 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 RBFAQ8N0V3 343 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 NXPE1Q8N323 547 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 DDHD1Q8NEL9 900 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 OR4L1Q8NH43 312 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 LRRC39Q96DD0 335 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 WDR83Q9BRX9 315 aaKnown RBP13.49□□□□□ -0.25
SP140-213ENST00000543928 NAT9Q9BTE0 207 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 OR2AG1Q9H205 316 aa13.49□□□□□ -0.25
SP140-213ENST00000543928 TCEAL2Q9H3H9 227 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms