RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 IYDQ6PHW0 289 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 INO80CQ6PI98 192 aaPredicted RBP7.09□□□□□ -1.27
NUP43-206ENST00000543637 SARM1Q6SZW1 724 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 XKR5Q6UX68 686 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 SPOCD1Q6ZMY3 1216 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 B4GALNT4Q76KP1 1039 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 ZNF438Q7Z4V0 828 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 ZNF605Q86T29 641 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 ZC3H18Q86VM9 953 aaKnown RBP7.09□□□□□ -1.27
NUP43-206ENST00000543637 C17orf82Q86X59 251 aaPredicted RBP7.09□□□□□ -1.27
NUP43-206ENST00000543637 TMTC1Q8IUR5 882 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 TRIM48Q8IWZ4 208 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 TXLNBQ8N3L3 684 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 TRAM1L1Q8N609 369 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 OR4D9Q8NGE8 314 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 PATE1Q8WXA2 126 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 NCSTNQ92542 709 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 SMIM14Q96QK8 99 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 HERPUD2Q9BSE4 406 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 ASPSCR1Q9BZE9 553 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 SEMA6CQ9H3T2 930 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 OSGEPL1Q9H4B0 414 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 TRABDQ9H4I3 376 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 SARS2Q9NP81 518 aaKnown RBP7.09□□□□□ -1.27
NUP43-206ENST00000543637 KLC4Q9NSK0 619 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 UBP1Q9NZI7 540 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 HACD3Q9P035 362 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 KLHL8Q9P2G9 620 aaPredicted RBP7.09□□□□□ -1.27
NUP43-206ENST00000543637 ATXN10Q9UBB4 475 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 TRHDEQ9UKU6 1024 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 PKP3Q9Y446 797 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 ZNF711Q9Y462 761 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 PRKAB1Q9Y478 270 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 PLEKHM1Q9Y4G2 1056 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 HYOU1Q9Y4L1 999 aa7.09□□□□□ -1.27
NUP43-206ENST00000543637 EPN1Q9Y6I3 576 aaPredicted RBP7.09□□□□□ -1.27
NUP43-206ENST00000543637 AKAP13Q12802 2813 aa7.09□□□□□ -1.28
NUP43-206ENST00000543637 PRAMEF33A0A0G2JMD5 474 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 IGHV5-10-1A0A0J9YXX1 117 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 A0A1W2PNU3 283 aaPredicted RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 CASC3O15234 703 aaKnown RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 PRAMEF10O60809 474 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 ZNF189O75820 626 aaPredicted RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 ANXA9O76027 345 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 MT-CYBP00156 380 aaPredicted RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 SOD1P00441 154 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 EPOP01588 193 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 PIRTP0C851 137 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 ACP5P13686 325 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 F3P13726 295 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 ZNF7P17097 686 aaPredicted RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 AMD1P17707 334 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 XRCC1P18887 633 aaPredicted RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 IDSP22304 550 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 PTPN3P26045 913 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 HALP42357 657 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 MAPK9P45984 424 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 FASLGP48023 281 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 CLCNKAP51800 687 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 PDX1P52945 283 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 GEMP55040 296 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 TMEM115Q12893 351 aaPredicted RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 CLN3Q13286 438 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 MPP3Q13368 585 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 XRCC4Q13426 336 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 NFATC2Q13469 925 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 LLGL1Q15334 1064 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 SNAP47Q5SQN1 464 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 DCAF12Q5T6F0 453 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 NKAIN2Q5VXU1 208 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 ITPRIPL1Q6GPH6 555 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 WDR74Q6RFH5 385 aaPredicted RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 ZNF574Q6ZN55 896 aaPredicted RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 LRRTM4Q86VH4 590 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 FAM129CQ86XR2 697 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 PLXDC1Q8IUK5 500 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 SLITRK4Q8IW52 837 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 SFTPA2Q8IWL1 248 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 KATNAL2Q8IYT4 538 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 SFRP1Q8N474 314 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 SLC25A41Q8N5S1 370 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 IL22RA1Q8N6P7 574 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 TC2NQ8N9U0 490 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 RCBTB1Q8NDN9 531 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 GPR26Q8NDV2 337 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 SPATA22Q8NHS9 363 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 SLC37A2Q8TED4 501 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 HTR3CQ8WXA8 447 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 GLYATL1Q969I3 302 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 HAUS1Q96CS2 278 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 CCDC74BQ96LY2 380 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 OLFM3Q96PB7 478 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 BBC3Q96PG8 261 aaPredicted RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 PLEKHG4BQ96PX9 1271 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 WDR24Q96S15 920 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 FSD1LQ9BXM9 530 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 ZCCHC2Q9C0B9 1178 aaKnown RBP7.08□□□□□ -1.28
NUP43-206ENST00000543637 OR2AG1Q9H205 316 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 EPB41L1Q9H4G0 881 aa7.08□□□□□ -1.28
NUP43-206ENST00000543637 BPIFA1Q9NP55 256 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms