RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 CD247P20963 164 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 NTSR1P30989 418 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 SERPINB6P35237 376 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ETV3P41162 512 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 CETN2P41208 172 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 KIR2DL1P43626 348 aaPredicted RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 MTNR1BP49286 362 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 NUMBP49757 651 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 PAPOLAP51003 745 aaKnown RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ARSEP51690 589 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 NDST2P52849 883 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 YBEYP58557 167 aaPredicted RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 MTAPQ13126 283 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 LRP8Q14114 963 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 DPYSQ14117 519 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ERV3-1Q14264 604 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF234Q14588 700 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ANKRD20A8PQ5CZ79 823 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 EOGTQ5NDL2 527 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 TMEM215Q68D42 235 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 BTN2A1Q7KYR7 527 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 NT5DC3Q86UY8 548 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 MOGAT3Q86VF5 341 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 CCDC50Q8IVM0 306 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 KATNAL2Q8IYT4 538 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 RCOR2Q8IZ40 523 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 UMODL1-AS1Q8N2C9 162 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 SPEM1Q8N4L4 309 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ARHGEF39Q8N4T4 335 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 CISD2Q8N5K1 135 aaKnown RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 LZTR1Q8N653 840 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 LRRC57Q8N9N7 239 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 DCAF4L2Q8NA75 395 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 IL17RCQ8NAC3 791 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 DTWD2Q8NBA8 298 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 OR52K2Q8NGK3 314 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 FAM71BQ8TC56 605 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 N4BP2L2Q92802 583 aaPredicted RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ARHGEF2Q92974 986 aaKnown RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 RBM41Q96IZ5 413 aaKnown RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 CELF6Q96J87 481 aaKnown RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF670Q9BS34 389 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 CNPPD1Q9BV87 410 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 TRMT1Q9NXH9 659 aaKnown RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 DLGAP2Q9P1A6 1054 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 THAP10Q9P2Z0 257 aaPredicted RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF212Q9UDV6 495 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 INTS6Q9UL03 887 aaKnown RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 SLC8A2Q9UPR5 921 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ERVW-1Q9UQF0 538 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 PCDHA3Q9Y5H8 950 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 GPR45Q9Y5Y3 372 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 CAPN6Q9Y6Q1 641 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 MYOFQ9NZM1 2061 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF318Q5VUA4 2279 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 ANTXRLA6NF34 631 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 MIF4GDA9UHW6 222 aaKnown RBP5.15□□□□□ -1.58
CLIP1-217ENST00000543205 DFFAO00273 331 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 DCLK1O15075 740 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 LAMTOR5O43504 91 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 SNAP91O60641 907 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 MT-ND3P03897 115 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 HOXB2P14652 356 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 JUPP14923 745 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 ZFXP17010 805 aaPredicted RBP5.15□□□□□ -1.58
CLIP1-217ENST00000543205 IL4RP24394 825 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 CTNNA2P26232 953 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 ACVRL1P37023 503 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 WASP42768 502 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 CXCL12P48061 93 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 POLD2P49005 469 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 CCR3P51677 355 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 CLNS1AP54105 237 aaKnown RBP5.15□□□□□ -1.58
CLIP1-217ENST00000543205 RWDD2BP57060 319 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 PARP15Q460N3 678 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 ACCSLQ4AC99 568 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 SERPINA13PQ6UXR4 307 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 SYT13Q7L8C5 426 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 RFX6Q8HWS3 928 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 C1orf210Q8IVY1 113 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 TRIM58Q8NG06 486 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 OR7D4Q8NG98 312 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 EXD1Q8NHP7 514 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 DNAJB8Q8NHS0 232 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 KRT35Q92764 455 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 ALG14Q96F25 216 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 HMCESQ96FZ2 354 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 APIPQ96GX9 242 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 RPL10LQ96L21 214 aaKnown RBP5.15□□□□□ -1.58
CLIP1-217ENST00000543205 ACOX2Q99424 681 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 PSMB7Q99436 277 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 ZMAT3Q9HA38 289 aaKnown RBP5.15□□□□□ -1.58
CLIP1-217ENST00000543205 ZDHHC4Q9NPG8 344 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 WHRNQ9P202 907 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 SUN2Q9UH99 717 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 VPS51Q9UID3 782 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 MMP17Q9ULZ9 603 aa5.15□□□□□ -1.58
CLIP1-217ENST00000543205 PADI4Q9UM07 663 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms