RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 DCCP43146 1447 aa5.9□□□□□ -1.47
XRCC4-206ENST00000542685 MEGF6O75095 1541 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 SCN7AQ01118 1682 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 C15orf38-AP3S2A0A0A6YYH1 394 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 A1L4Q6 167 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 C2orf81A6NN90 581 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.89□□□□□ -1.47
XRCC4-206ENST00000542685 RSPH10B2B2RC85 870 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 HNRNPCL2B2RXH8 293 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 TCP11X1B4DZS4 312 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 TISP43B9A030 160 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 H0Y3Z8 333 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 CASQ2O14958 399 aaPredicted RBP5.89□□□□□ -1.47
XRCC4-206ENST00000542685 MAGEB3O15480 346 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 RAD51CO43502 376 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 RNASEH1O60930 286 aaKnown RBP5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ENTPD5O75356 428 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 SPAG7O75391 227 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 TCEA3O75764 348 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 RNASEH2AO75792 299 aaKnown RBP5.89□□□□□ -1.47
XRCC4-206ENST00000542685 SULT1C4O75897 302 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 A1BGP04217 495 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 SHBGP04278 402 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 TFAP2AP05549 437 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 CD48P09326 243 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 RSPH10BP0C881 870 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 CYP2D6P10635 497 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 SCG2P13521 617 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ANPEPP15144 967 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 PHKG2P15735 406 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ZNF23P17027 643 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 CDH2P19022 906 aaPredicted RBP5.89□□□□□ -1.47
XRCC4-206ENST00000542685 BTF3P20290 206 aaKnown RBP5.89□□□□□ -1.47
XRCC4-206ENST00000542685 MUTP22033 750 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 KELP23276 732 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 JAK1P23458 1154 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 PSMA3P25788 255 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ANXA13P27216 316 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 EPHB2P29323 1055 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 PRDX6P30041 224 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 STX2P32856 288 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 HOXD13P35453 343 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 TRIM23P36406 574 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 RXRGP48443 463 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 UCP3P55916 312 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 C21orf59P57076 290 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 IL9RQ01113 521 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 C16orf72Q14CZ0 275 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 PDK3Q15120 406 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 KCNJ8Q15842 424 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 LEXMQ3ZCV2 418 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 DNAL1Q4LDG9 190 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ACSBG2Q5FVE4 666 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 TCP11X2Q5H9J9 407 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 TCHHL1Q5QJ38 904 aaPredicted RBP5.89□□□□□ -1.47
XRCC4-206ENST00000542685 C10orf76Q5T2E6 689 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ATAD3BQ5T9A4 648 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ZNF425Q6IV72 752 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ZNF449Q6P9G9 518 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 WDR59Q6PJI9 974 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 KYAT3Q6YP21 454 aaKnown RBP5.89□□□□□ -1.47
XRCC4-206ENST00000542685 RFPL4BQ6ZWI9 263 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 CYP4V2Q6ZWL3 525 aaPredicted RBP5.89□□□□□ -1.47
XRCC4-206ENST00000542685 CYB5R4Q7L1T6 521 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ARPINQ7Z6K5 226 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 PALB2Q86YC2 1186 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 CCDC28AQ8IWP9 274 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 DIS3L2Q8IYB7 885 aaKnown RBP5.89□□□□□ -1.47
XRCC4-206ENST00000542685 CENPSQ8N2Z9 138 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 EXD1Q8NHP7 514 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 TTC8Q8TAM2 541 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 BRSK1Q8TDC3 778 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 XAGE5Q8WWM1 108 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ARHGEF2Q92974 986 aaKnown RBP5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ERP27Q96DN0 273 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 NRBF2Q96F24 287 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ERGIC2Q96RQ1 377 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 KRT12Q99456 494 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 CHP1Q99653 195 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 MACROD1Q9BQ69 325 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 SH2D3AQ9BRG2 576 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 CENPOQ9BU64 300 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 OR2B2Q9GZK3 357 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ZMYND12Q9H0C1 365 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 MARCH7Q9H992 704 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 TRNAU1APQ9NX07 287 aaKnown RBP5.89□□□□□ -1.47
XRCC4-206ENST00000542685 MBD2Q9UBB5 411 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 NUP50Q9UKX7 468 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 SHOC2Q9UQ13 582 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 SH2B3Q9UQQ2 575 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 TMX2Q9Y320 296 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 ZNF804BA4D1E1 1349 aa5.89□□□□□ -1.47
XRCC4-206ENST00000542685 TTC26A0AVF1 554 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 ILVBLA1L0T0 632 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 MAGEB16A2A368 324 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 CCDC160A6NGH7 325 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 KCNJ18B7U540 433 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 H0YJX3 145 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 PGRMC1O00264 195 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 POLR1CO15160 346 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms