RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 TSSK3Q96PN8 268 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 PKP4Q99569 1192 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 SPATA5L1Q9BVQ7 753 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 CDH19Q9H159 772 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 IFT46Q9NQC8 304 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 UPB1Q9UBR1 384 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 PCDHGC4Q9Y5F7 938 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 PTCH2Q9Y6C5 1203 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 LOC100509620A0A075B734 347 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 TTC24A2A3L6 582 aaPredicted RBP6.28□□□□□ -1.4
DMD-228ENST00000541735 SEC14L5O43304 696 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 KLF8O95600 359 aaPredicted RBP6.28□□□□□ -1.4
DMD-228ENST00000541735 HGFP14210 728 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 CPN2P22792 545 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 CRABP2P29373 138 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 TTPAP49638 278 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 MAN2A2P49641 1150 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ALDH3A2P51648 485 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 NEK3P51956 506 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 DRG2P55039 364 aaKnown RBP6.28□□□□□ -1.4
DMD-228ENST00000541735 CCZ1BP86790 482 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 CCZ1P86791 482 aaPredicted RBP6.28□□□□□ -1.4
DMD-228ENST00000541735 ID2Q02363 134 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 MYO9BQ13459 2157 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 EOGTQ5NDL2 527 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ZCCHC12Q6PEW1 402 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ZNF720Q7Z2F6 126 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 GALNT5Q7Z7M9 940 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 CDH24Q86UP0 819 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 COX18Q8N8Q8 333 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 SLC5A5Q92911 643 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 SH3YL1Q96HL8 342 aaPredicted RBP6.28□□□□□ -1.4
DMD-228ENST00000541735 FCRL2Q96LA5 508 aaPredicted RBP6.28□□□□□ -1.4
DMD-228ENST00000541735 HBEGFQ99075 208 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ZSWIM1Q9BR11 485 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ADAP2Q9NPF8 381 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 DISP2A7MBM2 1401 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 YDJCA8MPS7 323 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 MRASO14807 208 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 HSPA12AO43301 675 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 SYNGR4O95473 234 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 PGAM1P18669 254 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 FASP25445 335 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 LRPAP1P30533 357 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 SHMT1P34896 483 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ELP6Q0PNE2 266 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 TERF2Q15554 542 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 KIAA1211LQ6NV74 962 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 TPRG1Q6ZUI0 275 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 TMCO2Q7Z6W1 182 aaPredicted RBP6.28□□□□□ -1.4
DMD-228ENST00000541735 ADGRA1Q86SQ6 560 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 TRAPPC6BQ86SZ2 158 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ZBTB8BQ8NAP8 495 aaPredicted RBP6.28□□□□□ -1.4
DMD-228ENST00000541735 OR7D4Q8NG98 312 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 OR6K6Q8NGW6 343 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ZNF398Q8TD17 642 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 DOK4Q8TEW6 326 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 APOL4Q9BPW4 351 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 TCF7L2Q9NQB0 619 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 CLN6Q9NWW5 311 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 TMEM98Q9Y2Y6 226 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 MEN1O00255 615 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 MPPED1O15442 326 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 PLATP00750 562 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 IFNGP01579 166 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 IRF2P14316 349 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 CCT3P49368 545 aaKnown RBP6.28□□□□□ -1.4
DMD-228ENST00000541735 ABATP80404 500 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 PPP3CAQ08209 521 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 SPANXN3Q5MJ09 141 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ARHGAP36Q6ZRI8 547 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 C12orf56Q8IXR9 622 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 DEPDC4Q8N2C3 294 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 C1orf216Q8TAB5 229 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ZNF473Q8WTR7 871 aaKnown RBP6.28□□□□□ -1.4
DMD-228ENST00000541735 APBB2Q92870 758 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ERP44Q9BS26 406 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 UNC93B1Q9H1C4 597 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ABCB9Q9NP78 766 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ENY2Q9NPA8 101 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 SEMA3GQ9NS98 782 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 SEC14L3Q9UDX4 400 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 CACNA1FO60840 1977 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 MED14O60244 1454 aa6.28□□□□□ -1.4
DMD-228ENST00000541735 ASTN2O75129 1339 aaPredicted RBP6.28□□□□□ -1.4
DMD-228ENST00000541735 WTIPA6NIX2 430 aaPredicted RBP6.27□□□□□ -1.4
DMD-228ENST00000541735 E7EQ34 232 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 PLIN3O60664 434 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 UGT2B17O75795 530 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 PRLRP16471 622 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 TFEBP19484 476 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 GATMP50440 423 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 SEC24CP53992 1094 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 C1QTNF8P60827 252 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 CLCA4Q14CN2 919 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 PDGFRLQ15198 375 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 TEAD2Q15562 447 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 RNF43Q68DV7 783 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 PYHIN1Q6K0P9 492 aa6.27□□□□□ -1.4
DMD-228ENST00000541735 KDM7AQ6ZMT4 941 aa6.27□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms