RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ISOC1Q96CN7 298 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 PLEKHG4BQ96PX9 1271 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 ASB2Q96Q27 587 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 SEMA3CQ99985 751 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 NTN4Q9HB63 628 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.48□□□□□ -0.898e-7■■■□□ 19.2
CNOT4-212ENST00000541284 LMCD1Q9NZU5 365 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 ZNHIT2Q9UHR6 403 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 CDC14AQ9UNH5 594 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 A0A1W2PP18 115 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 CCDC160A6NGH7 325 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 TMEM189-UBE2V1I3L0A0 370 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 CDC7O00311 574 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 EEDO75530 441 aaKnown RBP9.48□□□□□ -0.89
CNOT4-212ENST00000541284 OAZ2O95190 189 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 AKR1A1P14550 325 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 LBPP18428 481 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 GRK4P32298 578 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 STT3AP46977 705 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 CDKN1CP49918 316 aaPredicted RBP9.48□□□□□ -0.89
CNOT4-212ENST00000541284 AGTR2P50052 363 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 PRAMEP78395 509 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 ADARB1P78563 741 aaKnown RBP9.48□□□□□ -0.89
CNOT4-212ENST00000541284 CLCQ05315 142 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 DSC1Q08554 894 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 RAP1GAP2Q684P5 730 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 PRMT9Q6P2P2 845 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 RIMKLAQ8IXN7 391 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 C8orf48Q96LL4 319 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 ZNF599Q96NL3 588 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 DERL2Q9GZP9 239 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 ACTL8Q9H568 366 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 RPF2Q9H7B2 306 aaKnown RBP9.48□□□□□ -0.89
CNOT4-212ENST00000541284 PTBP2Q9UKA9 531 aaKnown RBP9.48□□□□□ -0.89
CNOT4-212ENST00000541284 PCTPQ9UKL6 214 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 MTCL1Q9Y4B5 1905 aaKnown RBP9.48□□□□□ -0.89
CNOT4-212ENST00000541284 KIAA1549LQ6ZVL6 1849 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 PRLP01236 227 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 INHBBP09529 407 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 CES1P23141 567 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 POLR2IP36954 125 aaKnown RBP9.48□□□□□ -0.89
CNOT4-212ENST00000541284 ETFBP38117 255 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 CACNB2Q08289 660 aaPredicted RBP9.48□□□□□ -0.89
CNOT4-212ENST00000541284 LCP2Q13094 533 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 SPATS1Q496A3 300 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 PDPRQ8NCN5 879 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 TSPEARQ8WU66 669 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.48□□□□□ -0.89
CNOT4-212ENST00000541284 CENPNQ96H22 339 aaPredicted RBP9.48□□□□□ -0.89
CNOT4-212ENST00000541284 TRIM54Q9BYV2 358 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 CIDEBQ9UHD4 219 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 TIMM22Q9Y584 194 aa9.48□□□□□ -0.89
CNOT4-212ENST00000541284 ZNF701M0R085 212 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-212ENST00000541284 GPR182O15218 404 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 ATE1O95260 518 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 GLP2RO95838 553 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 C1RP00736 705 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 EPOP01588 193 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 NCK1P16333 377 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 PBX3P40426 434 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 STX1BP61266 288 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 UFM1P61960 85 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 PLOD1Q02809 727 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-212ENST00000541284 ITKQ08881 620 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 TSNQ15631 228 aaKnown RBP9.47□□□□□ -0.89
CNOT4-212ENST00000541284 KIF19Q2TAC6 998 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 ZBED5Q49AG3 693 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 C5orf22Q49AR2 442 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 LHX8Q68G74 356 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 KLHL35Q6PF15 583 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 RTN4RL1Q86UN2 441 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-212ENST00000541284 MDGA1Q8NFP4 955 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 BRSK1Q8TDC3 778 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 BPIFB1Q8TDL5 484 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 NUDT8Q8WV74 236 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 CDKN2AIPNLQ96HQ2 116 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 UROC1Q96N76 676 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 TMEM74Q96NL1 305 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 MTG1Q9BT17 334 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-212ENST00000541284 SEZ6LQ9BYH1 1024 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 CRISPLD1Q9H336 500 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 SOX17Q9H6I2 414 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-212ENST00000541284 INTS7Q9NVH2 962 aaKnown RBP9.47□□□□□ -0.89
CNOT4-212ENST00000541284 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.47□□□□□ -0.89
CNOT4-212ENST00000541284 NLE1Q9NVX2 485 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-212ENST00000541284 MKI67P46013 3256 aaKnown RBP9.47□□□□□ -0.89
CNOT4-212ENST00000541284 LCHNA4D1U4 455 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 H3BNC9 293 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 ENPP3O14638 875 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 EI24O14681 340 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 TNPO2O14787 897 aaKnown RBP9.47□□□□□ -0.89
CNOT4-212ENST00000541284 SEPT4O43236 478 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 PRSS23O95084 383 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 FGF1P05230 155 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 RPLP2P05387 115 aaKnown RBP9.47□□□□□ -0.89
CNOT4-212ENST00000541284 C7P10643 843 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 HLA-DPA1P20036 260 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 GALK1P51570 392 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 TSPY1Q01534 308 aa9.47□□□□□ -0.89
CNOT4-212ENST00000541284 YWHAHQ04917 246 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms