RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 AGBL5Q8NDL9 886 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 SCAMP4Q969E2 229 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 ZNF514Q96K75 400 aaPredicted RBP10.3□□□□□ -0.76
CDCA3-208ENST00000540683 TEFMQ96QE5 360 aaKnown RBP10.3□□□□□ -0.76
CDCA3-208ENST00000540683 C19orf43Q9BQ61 176 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 ZPBPQ9BS86 351 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 SUDS3Q9H7L9 328 aaPredicted RBP10.3□□□□□ -0.76
CDCA3-208ENST00000540683 SARS2Q9NP81 518 aaKnown RBP10.3□□□□□ -0.76
CDCA3-208ENST00000540683 SPATS2LQ9NUQ6 558 aaKnown RBP10.3□□□□□ -0.76
CDCA3-208ENST00000540683 IMPACTQ9P2X3 320 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 FEZ2Q9UHY8 353 aaPredicted RBP10.3□□□□□ -0.76
CDCA3-208ENST00000540683 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 LOXL2Q9Y4K0 774 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 EPN1Q9Y6I3 576 aaPredicted RBP10.3□□□□□ -0.76
CDCA3-208ENST00000540683 UNC13CQ8NB66 2214 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 A0A1W2PQM1 296 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 MIF4GDA9UHW6 222 aaKnown RBP10.29□□□□□ -0.76
CDCA3-208ENST00000540683 ATXN7O15265 892 aaPredicted RBP10.29□□□□□ -0.76
CDCA3-208ENST00000540683 INPP4BO15327 924 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 NUAK1O60285 661 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 NDUFA10O95299 355 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 MMP2P08253 660 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 LIPCP11150 499 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 SFTPCP11686 197 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 ATP1A2P50993 1020 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 RWDD2BP57060 319 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 B4GALNT1Q00973 533 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 HHEXQ03014 270 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 C19orf57Q0VDD7 668 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 ZBTB17Q13105 803 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 TCEA2Q15560 299 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 PCSK7Q16549 785 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 AMZ1Q400G9 498 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 LDLRAP1Q5SW96 308 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 KAZNQ674X7 775 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 KLHL35Q6PF15 583 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 MFSD7Q6UXD7 560 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 CHST15Q7LFX5 561 aaPredicted RBP10.29□□□□□ -0.76
CDCA3-208ENST00000540683 PID1Q7Z2X4 250 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 TMC3Q7Z5M5 1100 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 KIAA1328Q86T90 577 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 PLXDC1Q8IUK5 500 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 CDKL3Q8IVW4 592 aaPredicted RBP10.29□□□□□ -0.76
CDCA3-208ENST00000540683 TRIM48Q8IWZ4 208 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 SFRP1Q8N474 314 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 BEND7Q8N7W2 519 aaPredicted RBP10.29□□□□□ -0.76
CDCA3-208ENST00000540683 CNTD1Q8N815 330 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 SNRNP27Q8WVK2 155 aaKnown RBP10.29□□□□□ -0.76
CDCA3-208ENST00000540683 HTR3CQ8WXA8 447 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 GLYATL1Q969I3 302 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 TADA1Q96BN2 335 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 NSMCE3Q96MG7 304 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 VPS35Q96QK1 796 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 FCRL5Q96RD9 977 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 TRIB3Q96RU7 358 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 CCNL2Q96S94 520 aaPredicted RBP10.29□□□□□ -0.76
CDCA3-208ENST00000540683 EFHD1Q9BUP0 239 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 UCK1Q9HA47 277 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 ATXN7L1Q9ULK2 861 aaPredicted RBP10.29□□□□□ -0.76
CDCA3-208ENST00000540683 ZNF711Q9Y462 761 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 ARHGEF17Q96PE2 2063 aaPredicted RBP10.29□□□□□ -0.76
CDCA3-208ENST00000540683 ZFHX4Q86UP3 3567 aa10.29□□□□□ -0.76
CDCA3-208ENST00000540683 C2orf81A6NN90 581 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 STMND1H3BQB6 276 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 H7C0C1 242 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 CAPN5O15484 640 aaPredicted RBP10.28□□□□□ -0.76
CDCA3-208ENST00000540683 PMPCBO75439 489 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 SOD1P00441 154 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 F3P13726 295 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 PTPN3P26045 913 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 ITPKBP27987 946 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 SLC5A2P31639 672 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 CTNNA1P35221 906 aaKnown RBP10.28□□□□□ -0.76
CDCA3-208ENST00000540683 PTPN7P35236 360 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 HALP42357 657 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 ATP5OP48047 213 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 POLD2P49005 469 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 LIMK2P53671 638 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 KIF5AQ12840 1032 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 GALNT3Q14435 633 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 INSCQ1MX18 579 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 TAF1BQ53T94 588 aaPredicted RBP10.28□□□□□ -0.76
CDCA3-208ENST00000540683 TMEM71Q6P5X7 295 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 BBS12Q6ZW61 710 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 MARK2Q7KZI7 788 aaKnown RBP10.28□□□□□ -0.76
CDCA3-208ENST00000540683 LRRTM4Q86VH4 590 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 NRROSQ86YC3 692 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 SLITRK4Q8IW52 837 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 NAGSQ8N159 534 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 GDAP1Q8TB36 358 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 HEXDCQ8WVB3 486 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 NAF1Q96HR8 494 aaKnown RBP10.28□□□□□ -0.76
CDCA3-208ENST00000540683 QKIQ96PU8 341 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDCA3-208ENST00000540683 TAAR9Q96RI9 348 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 TIMM29Q9BSF4 260 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 DDA1Q9BW61 102 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 FOXP3Q9BZS1 431 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 PISDQ9UG56 409 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 RSPH14Q9UHP6 348 aa10.28□□□□□ -0.76
CDCA3-208ENST00000540683 TMEM98Q9Y2Y6 226 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms