RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 LEFTY1O75610 366 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 IPO7O95373 1038 aaKnown RBP8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 RGRP47804 291 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 MARCKSL1P49006 195 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 PEX5P50542 639 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 DNA2P51530 1060 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 CCNHP51946 323 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 HK3P52790 923 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 IL10RBQ08334 325 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 ADCY2Q08462 1091 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 SLC10A7Q0GE19 358 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 TAZQ16635 292 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 MAP9Q49MG5 647 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 ZRANB3Q5FWF4 1079 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 ATXN7L2Q5T6C5 722 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 C11orf63Q6NUN7 778 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 OGFOD3Q6PK18 319 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 MFSD7Q6UXD7 560 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 MACC1Q6ZN28 852 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 MAP7D3Q8IWC1 876 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 PCDH20Q8N6Y1 951 aaKnown RBP8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 PLD5Q8N7P1 536 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 LRRC57Q8N9N7 239 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 TSEN2Q8NCE0 465 aaKnown RBP8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 AGBL5Q8NDL9 886 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 OR2AP1Q8NGE2 309 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 OR6K2Q8NGY2 324 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 CASKIN2Q8WXE0 1202 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 KRT35Q92764 455 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 ART4Q93070 314 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 HEPHQ9BQS7 1158 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 TRPM6Q9BX84 2022 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 SPRY4Q9C004 299 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 LUC7LQ9NQ29 371 aaKnown RBP8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 SLC39A1Q9NY26 324 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 UBA2Q9UBT2 640 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 ITGB1BP2Q9UKP3 347 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 POLHQ9Y253 713 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 SHANK1Q9Y566 2161 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 FADS3Q9Y5Q0 445 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 ANKHD1Q8IWZ3 2542 aaKnown RBP8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 NYNRINQ9P2P1 1898 aaKnown RBP8.83□□□□□ -1
TRAPPC1-202ENST00000540486 MACROD2A1Z1Q3 448 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 LRRD1A4D1F6 860 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 GOLGA6L6A8MZA4 724 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 ZNF487B1APH4 448 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 B4E171 279 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 TSPAN6O43657 245 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 SPOPO43791 374 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 MFSD11O43934 449 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 DIAPH2O60879 1101 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 PALMO75781 387 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 MAP3K6O95382 1288 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 POP4O95707 220 aaKnown RBP8.83□□□□□ -1
TRAPPC1-202ENST00000540486 GSRP00390 522 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 CELA2BP08218 269 aaPredicted RBP8.83□□□□□ -1
TRAPPC1-202ENST00000540486 HOXB4P17483 251 aaPredicted RBP8.83□□□□□ -1
TRAPPC1-202ENST00000540486 CSTF2P33240 577 aaKnown RBP eCLIP8.83□□□□□ -1
TRAPPC1-202ENST00000540486 TSPAN7P41732 249 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 CDKN2BP42772 138 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 NEK3P51956 506 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 PMS2P54278 862 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 NAP1L1P55209 391 aaKnown RBP8.83□□□□□ -1
TRAPPC1-202ENST00000540486 GEMIN4P57678 1058 aaKnown RBP8.83□□□□□ -1
TRAPPC1-202ENST00000540486 RHOAP61586 193 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 SNRPD1P62314 119 aaKnown RBP8.83□□□□□ -1
TRAPPC1-202ENST00000540486 B4GALNT1Q00973 533 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 GBE1Q04446 702 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 GALNT2Q10471 571 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 KIF5AQ12840 1032 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 LLGL1Q15334 1064 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 TESK1Q15569 626 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 FAM182AQ5T1J6 154 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 ZFYVE27Q5T4F4 411 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 SLC9A4Q6AI14 798 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 DAAM2Q86T65 1068 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 KIAA1328Q86T90 577 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 NT5DC3Q86UY8 548 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 VSIG1Q86XK7 387 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 PGBD5Q8N414 524 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 KIAA1524Q8TCG1 905 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 NANOS1Q8WY41 292 aaKnown RBP8.83□□□□□ -1
TRAPPC1-202ENST00000540486 PMEPA1Q969W9 287 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 CENPTQ96BT3 561 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 LURAP1Q96LR2 239 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 ZPBPQ9BS86 351 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 DDX56Q9NY93 547 aaKnown RBP8.83□□□□□ -1
TRAPPC1-202ENST00000540486 DTLQ9NZJ0 730 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 LRIT1Q9P2V4 623 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 IL36AQ9UHA7 158 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 PCDHA3Q9Y5H8 950 aa8.83□□□□□ -1
TRAPPC1-202ENST00000540486 IGHV5-10-1A0A0J9YXX1 117 aa8.82□□□□□ -1
TRAPPC1-202ENST00000540486 IGLON5A6NGN9 336 aa8.82□□□□□ -1
TRAPPC1-202ENST00000540486 KRIT1O00522 736 aa8.82□□□□□ -1
TRAPPC1-202ENST00000540486 B4GAT1O43505 415 aa8.82□□□□□ -1
TRAPPC1-202ENST00000540486 PSTPIP1O43586 416 aa8.82□□□□□ -1
TRAPPC1-202ENST00000540486 ZRANB2O95218 330 aaKnown RBP eCLIP8.82□□□□□ -1
TRAPPC1-202ENST00000540486 RASGRP1O95267 797 aa8.82□□□□□ -1
TRAPPC1-202ENST00000540486 CBX6O95503 412 aa8.82□□□□□ -1
TRAPPC1-202ENST00000540486 PDGFAP04085 211 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms