RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 ATXN10Q9UBB4 475 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 TBC1D29Q9UFV1 150 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 PISDQ9UG56 409 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 ZNHIT2Q9UHR6 403 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 PIEZO2Q9H5I5 2752 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 PRAMEF33A0A0G2JMD5 474 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 OR5K4A6NMS3 321 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 CST8O60676 142 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 PRAMEF10O60809 474 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 ASMTLO95671 621 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 NDST3O95803 873 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 MT-CYBP00156 380 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 PRB1P04280 392 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 FGF3P11487 239 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 FECHP22830 423 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 CSF2RBP32927 897 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 NOP2P46087 812 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 AMZ1Q400G9 498 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 PHF19Q5T6S3 580 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 WDR74Q6RFH5 385 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 SPOCD1Q6ZMY3 1216 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 MARK2Q7KZI7 788 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 RCOR2Q8IZ40 523 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 SPATA22Q8NHS9 363 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 TFB1MQ8WVM0 346 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 USP7Q93009 1102 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 VPS35Q96QK1 796 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 HERPUD2Q9BSE4 406 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 FOXJ2Q9P0K8 574 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 SAE1Q9UBE0 346 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 ZNF711Q9Y462 761 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 HYOU1Q9Y4L1 999 aa12.97□□□□□ -0.33
SEMA4D-223ENST00000540475 hCG_1818297A0A087WSY0 165 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 KIR2DS5A0A0G2JLQ3 304 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 A0A0G2JNG1 304 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 KIR2DS3K7RE56 304 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 MTSS1O43312 755 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 GRID2O43424 1007 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 SPOPO43791 374 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 ZRANB2O95218 330 aaKnown RBP eCLIP12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 CCL4P13236 92 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 F3P13726 295 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 PECAM1P16284 738 aaPredicted RBP12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 ZNF8P17098 575 aaPredicted RBP12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 BPIP17213 487 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 HMGCLP35914 325 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 KIR2DS5Q14953 304 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 TGIF1Q15583 401 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 TFDP3Q5H9I0 405 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 FAM182AQ5T1J6 154 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 NKAIN2Q5VXU1 208 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 C11orf63Q6NUN7 778 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 KDELC1Q6UW63 502 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 CHST15Q7LFX5 561 aaPredicted RBP12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 ARHGAP22Q7Z5H3 698 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 ADGRG6Q86SQ4 1221 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 JAMLQ86YT9 394 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 BMPERQ8N8U9 685 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 GLYATL1Q969I3 302 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 SH3KBP1Q96B97 665 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 CALR3Q96L12 384 aaKnown RBP12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 CCDC74BQ96LY2 380 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 PLEKHG4BQ96PX9 1271 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 FCRL5Q96RD9 977 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 TAAR9Q96RI9 348 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 VAT1Q99536 393 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 ANP32EQ9BTT0 268 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 DDA1Q9BW61 102 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 TRABDQ9H4I3 376 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 UCK1Q9HA47 277 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 KCNK4Q9NYG8 393 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 AKAP7Q9P0M2 348 aaPredicted RBP12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 TMPRSS11EQ9UL52 423 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 PRKAB1Q9Y478 270 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 PCDHA13Q9Y5I0 950 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 SPO11Q9Y5K1 396 aa12.96□□□□□ -0.33
SEMA4D-223ENST00000540475 HACD1B0YJ81 288 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 B4E171 279 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 AURKAO14965 403 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 VEGFDO43915 354 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 SLC25A14O95258 325 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 SLC2A4P14672 509 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 XRCC1P18887 633 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 TSPAN7P41732 249 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 EPHA4P54764 986 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 DYNLT1P63172 113 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 UBE2IP63279 158 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 HHEXQ03014 270 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 XRCC4Q13426 336 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 PPP2R5EQ16537 467 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 ODF2Q5BJF6 829 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 ZNF569Q5MCW4 686 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 TMEM164Q5U3C3 297 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 XKR5Q6UX68 686 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 B4GALNT4Q76KP1 1039 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 AVL9Q8NBF6 648 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 AGBL5Q8NDL9 886 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 RCBTB1Q8NDN9 531 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 P3H4Q92791 437 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms