RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 TRMOQ9BU70 441 aa11.45□□□□□ -0.58
C11orf54-214ENST00000540113 RNF38Q9H0F5 515 aa11.45□□□□□ -0.58
C11orf54-214ENST00000540113 MAGEH1Q9H213 219 aa11.45□□□□□ -0.58
C11orf54-214ENST00000540113 CCDC68Q9H2F9 335 aa11.45□□□□□ -0.58
C11orf54-214ENST00000540113 PIF1Q9H611 641 aa11.45□□□□□ -0.58
C11orf54-214ENST00000540113 SEPT3Q9UH03 358 aa11.45□□□□□ -0.58
C11orf54-214ENST00000540113 RAB26Q9ULW5 256 aa11.45□□□□□ -0.58
C11orf54-214ENST00000540113 TBC1D30Q9Y2I9 924 aa11.45□□□□□ -0.58
C11orf54-214ENST00000540113 TRIM17Q9Y577 477 aa11.45□□□□□ -0.58
C11orf54-214ENST00000540113 ANAPC1Q9H1A4 1944 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 PLOD2O00469 737 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 HOXA2O43364 376 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 PQBP1O60828 265 aaKnown RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 PRAMEF12O95522 483 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 EPOP01588 193 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 C8BP07358 591 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 RHOCP08134 193 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 SPATA31D3P0C874 917 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 PIM1P11309 404 aaPredicted RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 RPL10P27635 214 aaKnown RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 CORO1AP31146 461 aaKnown RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 MC4RP32245 332 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 SLC26A3P40879 764 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 SUOXP51687 545 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 HK3P52790 923 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 CCL23P55773 120 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 TYSND1Q2T9J0 566 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 FUT11Q495W5 492 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 RNF219Q5W0B1 726 aaPredicted RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 C8orf82Q6P1X6 216 aaPredicted RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 SPATA31D4Q6ZUB0 917 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 SYVN1Q86TM6 617 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 DHFR2Q86XF0 187 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 RNF168Q8IYW5 571 aaPredicted RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 FUBP1Q96AE4 644 aaKnown RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 BIRC8Q96P09 236 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 PSKH2Q96QS6 385 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 MUC3BQ9H195 1237 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 TFB2MQ9H5Q4 396 aaKnown RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 TAS2R13Q9NYV9 303 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 ZNF225Q9UK10 706 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 AGO1Q9UL18 857 aaKnown RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 USP22Q9UPT9 525 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 AURKCQ9UQB9 309 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 RAI2Q9Y5P3 530 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 MKI67P46013 3256 aaKnown RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 C2orf78A6NCI8 922 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 GOLGA8CPA6NN73 597 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 STC2O76061 302 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 TFAP2AP05549 437 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 CTPS1P17812 591 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 OGNP20774 298 aaKnown RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 CDH4P55283 916 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 RAD51Q06609 339 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 BTG3Q14201 252 aaPredicted RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 RPS6KA2Q15349 733 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 RBBP7Q16576 425 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 MAP7D1Q3KQU3 841 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 CTSL3PQ5NE16 218 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 TAS2R42Q7RTR8 314 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 CPNE9Q8IYJ1 553 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 MIER2Q8N344 545 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 OR6K2Q8NGY2 324 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 DNAJB14Q8TBM8 379 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 STAG3L4Q8TBR4 150 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 KIAA1191Q96A73 305 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 CLSTN3Q9BQT9 956 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 TDRD1Q9BXT4 1180 aaKnown RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 SLAMF8Q9P0V8 285 aa11.44□□□□□ -0.58
C11orf54-214ENST00000540113 EIF2B4Q9UI10 523 aaKnown RBP11.44□□□□□ -0.58
C11orf54-214ENST00000540113 GBF1Q92538 1859 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 TCRBV3S1A0A5B6 114 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 CCDC160A6NGH7 325 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 SAC3D1A6NKF1 404 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 ANGPT2O15123 496 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 AKAP10O43572 662 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 KDELR3O43731 214 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 KERAO60938 352 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 BAIAP3O94812 1187 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 MTHFD1P11586 935 aaKnown RBP11.43□□□□□ -0.58
C11orf54-214ENST00000540113 NCK1P16333 377 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 ITGB6P18564 788 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 CR2P20023 1033 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 ARL1P40616 181 aaPredicted RBP11.43□□□□□ -0.58
C11orf54-214ENST00000540113 PSMD8P48556 350 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 SLC11A2P49281 568 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 TRAF2Q12933 501 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 AAK1Q2M2I8 961 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 SAMD4BQ5PRF9 694 aaKnown RBP11.43□□□□□ -0.58
C11orf54-214ENST00000540113 HECTD3Q5T447 861 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 ATXN7L2Q5T6C5 722 aaPredicted RBP11.43□□□□□ -0.58
C11orf54-214ENST00000540113 RBM44Q6ZP01 1051 aaKnown RBP11.43□□□□□ -0.58
C11orf54-214ENST00000540113 OR2T11Q8NH01 316 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 RHEBL1Q8TAI7 183 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 CDK5RAP1Q96SZ6 601 aaKnown RBP11.43□□□□□ -0.58
C11orf54-214ENST00000540113 Q9H521 79 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 CWH43Q9H720 699 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 CMTM6Q9NX76 183 aa11.43□□□□□ -0.58
C11orf54-214ENST00000540113 RNF11Q9Y3C5 154 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms