RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SUSD6Q92537 303 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 PBXIP1Q96AQ6 731 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 NXNL1Q96CM4 212 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 SCYL1Q96KG9 808 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 MRPL46Q9H2W6 279 aaKnown RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 RAD18Q9NS91 495 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 THAP1Q9NVV9 213 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 TAS2R13Q9NYV9 303 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 KLHL14Q9P2G3 628 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 THAP10Q9P2Z0 257 aaPredicted RBP16.78■□□□□ 0.28
COPS3-212ENST00000539941 PCDHB1Q9Y5F3 818 aa16.78■□□□□ 0.28
COPS3-212ENST00000539941 EME2A4GXA9 379 aaPredicted RBP16.77■□□□□ 0.28
COPS3-212ENST00000539941 GOLGA8CPA6NN73 597 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 ANHXE9PGG2 379 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 APODP05090 189 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 PYGLP06737 847 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 RBP1P09455 135 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 MYL2P10916 166 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 TIMP2P16035 220 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 KCNA4P22459 653 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 LHCGRP22888 699 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 RPS3P23396 243 aaKnown RBP eCLIP16.77■□□□□ 0.28
COPS3-212ENST00000539941 CDKN1CP49918 316 aaPredicted RBP16.77■□□□□ 0.28
COPS3-212ENST00000539941 PTSQ03393 145 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 DLG1Q12959 904 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 HTR4Q13639 388 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 ZNF234Q14588 700 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 ACAP2Q15057 778 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 C9orf64Q5T6V5 341 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 FAM151BQ6UXP7 276 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 C10orf107Q8IVU9 208 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 FSTL5Q8N475 847 aaPredicted RBP16.77■□□□□ 0.28
COPS3-212ENST00000539941 TMEM151AQ8N4L1 468 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 ZNF398Q8TD17 642 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 DTX3LQ8TDB6 740 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 HEXDCQ8WVB3 486 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 HLA-CQ95604 372 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 BIRC8Q96P09 236 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 FAM96AQ9H5X1 160 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 ASB8Q9H765 288 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 SYTL2Q9HCH5 934 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 PKD2L2Q9NZM6 624 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 CD207Q9UJ71 328 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 ARL2BPQ9Y2Y0 163 aa16.77■□□□□ 0.28
COPS3-212ENST00000539941 C16orf96A6NNT2 1141 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 AGAP14A8MT82 685 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 TARM1B6A8C7 271 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 PDLIM1O00151 329 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 PRMT5O14744 637 aaPredicted RBP16.76■□□□□ 0.27
COPS3-212ENST00000539941 RHOBTB1O94844 696 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 CCDC166P0CW27 439 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 RALBP11234 206 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 ZNF7P17097 686 aaPredicted RBP16.76■□□□□ 0.27
COPS3-212ENST00000539941 XPAP23025 273 aaPredicted RBP16.76■□□□□ 0.27
COPS3-212ENST00000539941 FMO4P31512 558 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 PEX19P40855 299 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 TIAL1Q01085 375 aaKnown RBP eCLIP16.76■□□□□ 0.27
COPS3-212ENST00000539941 OCRLQ01968 901 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 ASPHQ12797 758 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 PDAP1Q13442 181 aaKnown RBP16.76■□□□□ 0.27
COPS3-212ENST00000539941 CSHL1Q14406 222 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 SERPINA13PQ6UXR4 307 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 DPPA4Q7L190 304 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 RAVER1Q8IY67 606 aaKnown RBP16.76■□□□□ 0.27
COPS3-212ENST00000539941 RBFAQ8N0V3 343 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 OR6Y1Q8NGX8 325 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 CHFRQ96EP1 664 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 TSC22D3Q99576 134 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 CDH19Q9H159 772 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 P2RY12Q9H244 342 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 MTG2Q9H4K7 406 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 OXSMQ9NWU1 459 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 NFKBIL1Q9UBC1 381 aaPredicted RBP16.76■□□□□ 0.27
COPS3-212ENST00000539941 SUN2Q9UH99 717 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 FNDC3AQ9Y2H6 1198 aaKnown RBP16.76■□□□□ 0.27
COPS3-212ENST00000539941 OAS3Q9Y6K5 1087 aaKnown RBP16.76■□□□□ 0.27
COPS3-212ENST00000539941 NUMBLQ9Y6R0 609 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 BPTFQ12830 3046 aa16.76■□□□□ 0.27
COPS3-212ENST00000539941 RGSL1A5PLK6 1076 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 TK2O00142 265 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 NPC1O15118 1278 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 TRIM13O60858 407 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 VPS26AO75436 327 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 C1SP09871 688 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 ZNF37AP17032 561 aaPredicted RBP16.75■□□□□ 0.27
COPS3-212ENST00000539941 ITGB7P26010 798 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 SKIV2L2P42285 1042 aaKnown RBP16.75■□□□□ 0.27
COPS3-212ENST00000539941 SPINT3P49223 89 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 PGGT1BP53609 377 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 DCDC1P59894 354 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 MRPS35P82673 323 aaKnown RBP16.75■□□□□ 0.27
COPS3-212ENST00000539941 ERAP2Q6P179 960 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 DSG4Q86SJ6 1040 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 SERPINA9Q86WD7 417 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 ZNF366Q8N895 744 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 GPR26Q8NDV2 337 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 CFAP61Q8NHU2 1237 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 KCNJ9Q92806 393 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 ULK4Q96C45 1275 aa16.75■□□□□ 0.27
COPS3-212ENST00000539941 THOC1Q96FV9 657 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms