RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 CHRNA4P43681 627 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 FASLGP48023 281 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 CLN3Q13286 438 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 C16orf72Q14CZ0 275 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 KHDC1Q4VXA5 237 aaKnown RBP16.6■□□□□ 0.25
DDB1-215ENST00000539712 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.6■□□□□ 0.25
DDB1-215ENST00000539712 NKAIN2Q5VXU1 208 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 ALS2CLQ60I27 953 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 PCSK4Q6UW60 755 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 TMEM139Q8IV31 216 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 TTC30BQ8N4P2 665 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 LRRC57Q8N9N7 239 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 SLC37A2Q8TED4 501 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 HTR3CQ8WXA8 447 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 FCRL5Q96RD9 977 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 GORASP1Q9BQQ3 440 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 RMI1Q9H9A7 625 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 CPNE5Q9HCH3 593 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 FAM153AQ9UHL3 310 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 ACSL6Q9UKU0 697 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 LOXL2Q9Y4K0 774 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 PIEZO2Q9H5I5 2752 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 GCN1Q92616 2671 aaKnown RBP16.59■□□□□ 0.25
DDB1-215ENST00000539712 IGHV1OR21-1A0A087WYE8 117 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 IGHV5-10-1A0A0J9YXX1 117 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 PRR19A6NJB7 356 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 PJA2O43164 708 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 MTSS1O43312 755 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 ITIH1P19827 911 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 CSF2RBP32927 897 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 CXADRP78310 365 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 PEX6Q13608 980 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 CLPPQ16740 277 aaPredicted RBP16.59■□□□□ 0.25
DDB1-215ENST00000539712 SIRPB2Q5JXA9 342 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 IYDQ6PHW0 289 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 CHST15Q7LFX5 561 aaPredicted RBP16.59■□□□□ 0.25
DDB1-215ENST00000539712 ADGRG6Q86SQ4 1221 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 PIM3Q86V86 326 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 CCDC50Q8IVM0 306 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 TRAM1L1Q8N609 369 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 ACRBPQ8NEB7 543 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 SNRNP27Q8WVK2 155 aaKnown RBP16.59■□□□□ 0.25
DDB1-215ENST00000539712 ALG3Q92685 438 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 RBM41Q96IZ5 413 aaKnown RBP16.59■□□□□ 0.25
DDB1-215ENST00000539712 ZSCAN5AQ9BUG6 496 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 SPATA16Q9BXB7 569 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 GPR63Q9BZJ6 419 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 OR2AG1Q9H205 316 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 CARD9Q9H257 536 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 TRIM39Q9HCM9 518 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 SLC23A2Q9UGH3 650 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 KCNK6Q9Y257 313 aa16.59■□□□□ 0.25
DDB1-215ENST00000539712 BOD1L1Q8NFC6 3051 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 A0A0U1RQJ8 604 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 HACD1B0YJ81 288 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 F5H423 210 aaPredicted RBP16.58■□□□□ 0.24
DDB1-215ENST00000539712 APOC4-APOC2K7ER74 178 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 AGRPO00253 132 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 CHUKO15111 745 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 NVLO15381 856 aaKnown RBP16.58■□□□□ 0.24
DDB1-215ENST00000539712 EFSO43281 561 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 GRID2O43424 1007 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 SLC25A14O95258 325 aaPredicted RBP16.58■□□□□ 0.24
DDB1-215ENST00000539712 APOC2P02655 101 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 SLC4A1P02730 911 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 ACP5P13686 325 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 RBL1P28749 1068 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 CA5AP35218 305 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 HMGCLP35914 325 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 COPS2P61201 443 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 XRCC4Q13426 336 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 ZNF569Q5MCW4 686 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 PDPK2PQ6A1A2 396 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 AADACL2Q6P093 401 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 PID1Q7Z2X4 250 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 GPR155Q7Z3F1 870 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 ZNF761Q86XN6 746 aaPredicted RBP16.58■□□□□ 0.24
DDB1-215ENST00000539712 ZNF547Q8IVP9 402 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 GLYATL1Q969I3 302 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 TMEM159Q96B96 161 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 UBL7Q96S82 380 aaPredicted RBP16.58■□□□□ 0.24
DDB1-215ENST00000539712 VAT1Q99536 393 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 ANP32EQ9BTT0 268 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 BPIFA1Q9NP55 256 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 LUC7LQ9NQ29 371 aaKnown RBP16.58■□□□□ 0.24
DDB1-215ENST00000539712 TMEM9Q9P0T7 183 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 KLHL8Q9P2G9 620 aaPredicted RBP16.58■□□□□ 0.24
DDB1-215ENST00000539712 PISDQ9UG56 409 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 EFR3BQ9Y2G0 817 aa16.58■□□□□ 0.24
DDB1-215ENST00000539712 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.58■□□□□ 0.24
DDB1-215ENST00000539712 GRID2IPA4D2P6 1211 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 C9orf172C9J069 976 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 CCL4P13236 92 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 CTNNA2P26232 953 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 PTPN7P35236 360 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 CLCNKAP51800 687 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 LIMK2P53671 638 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 SLC1A5Q15758 541 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 MAP9Q49MG5 647 aa16.57■□□□□ 0.24
DDB1-215ENST00000539712 ATP13A5Q4VNC0 1218 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms