RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CTSL3PQ5NE16 218 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 KRT80Q6KB66 452 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 CATSPER1Q8NEC5 780 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 TSPAN14Q8NG11 270 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 LRRC58Q96CX6 371 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 FEM1CQ96JP0 617 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 CINPQ9BW66 212 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-210ENST00000539599 RNF186Q9NXI6 227 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 OAZ3Q9UMX2 235 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 CASP8AP2Q9UKL3 1982 aa13.97□□□□□ -0.17
UBE3B-210ENST00000539599 SMIM31A0A1B0GVY4 71 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 FOXD2O60548 495 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-210ENST00000539599 HLA-DPA1P20036 260 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 GKP32189 559 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 MC4RP32245 332 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 GGT5P36269 586 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 YAP1P46937 504 aaKnown RBP13.96□□□□□ -0.17
UBE3B-210ENST00000539599 ZFP36L2P47974 494 aaKnown RBP13.96□□□□□ -0.17
UBE3B-210ENST00000539599 SLC11A1P49279 550 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 CREB5Q02930 508 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 RGMBQ6NW40 437 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 SLC2A7Q6PXP3 512 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 RAB44Q7Z6P3 723 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-210ENST00000539599 ZBTB46Q86UZ6 589 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 CARM1Q86X55 608 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 PPP1R2P1Q96PQ5 205 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 PLXNA3P51805 1871 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 DHRS12A0PJE2 317 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 NDST3O95803 873 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 IGLV3-27P01718 113 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 ALPIP09923 528 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 LBPP18428 481 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 NFKB2Q00653 900 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 GALNT1Q10472 559 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-210ENST00000539599 NFYCQ13952 458 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 PBXIP1Q96AQ6 731 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 LINGO1Q96FE5 620 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 FUBP3Q96I24 572 aaKnown RBP eCLIP13.96□□□□□ -0.17
UBE3B-210ENST00000539599 ABCG8Q9H221 673 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 SLC52A3Q9NQ40 469 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 MAGED1Q9Y5V3 778 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-210ENST00000539599 DNAH14Q0VDD8 3507 aa13.96□□□□□ -0.17
UBE3B-210ENST00000539599 TANC1Q9C0D5 1861 aa13.96□□□□□ -0.18
UBE3B-210ENST00000539599 TSPAN12O95859 305 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 CNPP09543 421 aaKnown RBP13.95□□□□□ -0.18
UBE3B-210ENST00000539599 LCP2Q13094 533 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 SELPLGQ14242 412 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 NHSL2Q5HYW2 709 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 ATXN7L2Q5T6C5 722 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-210ENST00000539599 KIAA2013Q8IYS2 634 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 FIBCD1Q8N539 461 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 TRIML2Q8N7C3 387 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 HGH1Q9BTY7 390 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 TRMOQ9BU70 441 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 CCDC68Q9H2F9 335 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 LTB4R2Q9NPC1 389 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 TLR9Q9NR96 1032 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 GPR45Q9Y5Y3 372 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 CEPT1Q9Y6K0 416 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 KERAO60938 352 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 GUCA1CO95843 209 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 GSK3BP49841 420 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 DGKQP52824 942 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 ACLYP53396 1101 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 CYP51A1Q16850 503 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 TAS2R42Q7RTR8 314 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 ZNF786Q8N393 782 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 PCYOX1LQ8NBM8 494 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 CYGBQ8WWM9 190 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 KIAA1191Q96A73 305 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 EID2BQ96D98 161 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 VCX3AQ9NNX9 186 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 SDR39U1Q9NRG7 319 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-210ENST00000539599 TAS2R13Q9NYV9 303 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 UBA2Q9UBT2 640 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-210ENST00000539599 RAI2Q9Y5P3 530 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 ANKRD36A6QL64 1941 aa13.95□□□□□ -0.18
UBE3B-210ENST00000539599 H3BNC9 293 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 K7ERQ8 282 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 INSIG1O15503 277 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 C1RP00736 705 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 PCNAP12004 261 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 SUOXP51687 545 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 MAPK10P53779 464 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 CTBSQ01459 385 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 TRAF2Q12933 501 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 TYSND1Q2T9J0 566 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 ANKS6Q68DC2 871 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 ERMP1Q7Z2K6 904 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 ABI1Q8IZP0 508 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 DBF4BQ8NFT6 615 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 GABPB2Q8TAK5 448 aaPredicted RBP13.94□□□□□ -0.18
UBE3B-210ENST00000539599 STAG3L4Q8TBR4 150 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 HIC2Q96JB3 615 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 SCUBE2Q9NQ36 999 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 NLE1Q9NVX2 485 aaPredicted RBP13.94□□□□□ -0.18
UBE3B-210ENST00000539599 CD274Q9NZQ7 290 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 HSFX1Q9UBD0 423 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 PCTPQ9UKL6 214 aa13.94□□□□□ -0.18
UBE3B-210ENST00000539599 FCF1Q9Y324 198 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms