RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CCDC124Q96CT7 223 aaKnown RBP17■□□□□ 0.31
PCDHB17P-201ENST00000539533 SLC2A11Q9BYW1 496 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 CHCHD3Q9NX63 227 aaKnown RBP17■□□□□ 0.31
PCDHB17P-201ENST00000539533 ATXN10Q9UBB4 475 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 FKBPLQ9UIM3 349 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 FBXO10Q9UK96 956 aa17■□□□□ 0.31
PCDHB17P-201ENST00000539533 HEPACAM2A8MVW5 462 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 STX7O15400 261 aaKnown RBP16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 POLD2P49005 469 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 CDKN1CP49918 316 aaPredicted RBP16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 MESP2Q0VG99 397 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 MED21Q13503 144 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 DMC1Q14565 340 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 MRNIPQ6NTE8 343 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 ATG14Q6ZNE5 492 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 GALNT7Q86SF2 657 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 C10orf107Q8IVU9 208 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 KCTD4Q8WVF5 259 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 SORT1Q99523 831 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 SHCBP1LQ9BZQ2 653 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 UNKQ9C0B0 810 aaKnown RBP16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 FAM96AQ9H5X1 160 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 MAGEE1Q9HCI5 957 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 ERVW-1Q9UQF0 538 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 ZNF711Q9Y462 761 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 A8MX80 341 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 CISD3P0C7P0 127 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 UQCRBP14927 111 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 GRK2P25098 689 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 PSMA3P25788 255 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 PEX2P28328 305 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 SERPINA4P29622 427 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 AQP4P55087 323 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 XIAPP98170 497 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 POU4F1Q01851 419 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 CARD16Q5EG05 197 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 CENPLQ8N0S6 344 aaPredicted RBP16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 CHST14Q8NCH0 376 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 CMTM5Q96DZ9 223 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 GPR63Q9BZJ6 419 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 ZDHHC6Q9H6R6 413 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 HACD3Q9P035 362 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 RUVBL2Q9Y230 463 aaKnown RBP16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 ACOT9Q9Y305 439 aa16.99■□□□□ 0.31
PCDHB17P-201ENST00000539533 A0A0J9YYE9 177 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 SOCS5O75159 536 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 TRBC1P01850 177 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 PIM1P11309 404 aaPredicted RBP16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 ALOX15P16050 662 aaPredicted RBP16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 ARRB2P32121 409 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 HNF1BP35680 557 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 GLRBP48167 497 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 DGKGP49619 791 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 CLCN5P51795 746 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 SLC12A2P55011 1212 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 SEMG2Q02383 582 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 HECTD2Q5U5R9 776 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 TANGO2Q6ICL3 276 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 ANKRD54Q6NXT1 300 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 TMEM184AQ6ZMB5 413 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 PCDH20Q8N6Y1 951 aaKnown RBP16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 MRGPRX3Q96LB0 322 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 CIPCQ9C0C6 399 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 NSUN3Q9H649 340 aaKnown RBP16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 NMRAL1Q9HBL8 299 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 GDE1Q9NZC3 331 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 IL17CQ9P0M4 197 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 COPG2Q9UBF2 871 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 POMPQ9Y244 141 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 VWA7Q9Y334 891 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 EYSQ5T1H1 3165 aa16.98■□□□□ 0.31
PCDHB17P-201ENST00000539533 ZNF195O14628 629 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 TNRC18O15417 2968 aaPredicted RBP16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 TULP3O75386 442 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 ADH1CP00326 375 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 ITGAXP20702 1163 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 PMLP29590 882 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 MC4RP32245 332 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 STC1P52823 247 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 DLG1Q12959 904 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 PEX6Q13608 980 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 CCDC153Q494R4 210 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 VWA5B1Q5TIE3 1220 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 ZNF549Q6P9A3 640 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 AFTPHQ6ULP2 937 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 CEP44Q9C0F1 390 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 MTG2Q9H4K7 406 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 SUV39H2Q9H5I1 410 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 ANKRD6Q9Y2G4 727 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 MTF2Q9Y483 593 aaPredicted RBP16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 COMMD3-BMI1R4GMX3 469 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 TTC34A8MYJ7 566 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 HOXC11O43248 304 aaPredicted RBP16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 VCLP18206 1134 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 FCARP24071 287 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 HMGCLP35914 325 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 SLC6A11P48066 632 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 CDKN2DP55273 166 aa16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 RPL26P61254 145 aaKnown RBP16.97■□□□□ 0.31
PCDHB17P-201ENST00000539533 LSAMPQ13449 338 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms