RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CTU2Q2VPK5 515 aaKnown RBP18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 PAGE3Q5JUK9 113 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 CELF3Q5SZQ8 465 aaKnown RBP18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 HECTD2Q5U5R9 776 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 AKAP14Q86UN6 197 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 ZDHHC13Q8IUH4 622 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 MMAAQ8IVH4 418 aaKnown RBP18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 CALML6Q8TD86 181 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 PHF10Q8WUB8 498 aaKnown RBP18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 SDCCAG3Q96C92 435 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 PLEKHA5Q9HAU0 1116 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 MAGEL2Q9UJ55 1249 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 FBXW11Q9UKB1 542 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 MYLKQ15746 1914 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 NUAK1O60285 661 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 KPNA6O60684 536 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 FOXA1P55317 472 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 ZNF33AQ06730 810 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 CD47Q08722 323 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 ADPRMQ3LIE5 342 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 ADCK1Q86TW2 530 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 OR13J1Q8NGT2 312 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 TUBB1Q9H4B7 451 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 USP22Q9UPT9 525 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 SBF1O95248 1867 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 ZSWIM8A7E2V4 1837 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 A8MU76 341 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 C19orf81C9J6K1 198 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 VPS4BO75351 444 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 ENO2P09104 434 aaPredicted RBP18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 NDUFV1P49821 464 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 DIO3P55073 304 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 CLCQ05315 142 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 GRIK2Q13002 908 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 GLYATQ6IB77 296 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 HFE2Q6ZVN8 426 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 LACC1Q8IV20 430 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 GABPB2Q8TAK5 448 aaPredicted RBP18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 NDNFQ8TB73 568 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 IL12RB2Q99665 862 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 LRRC3Q9BY71 257 aa18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 LEF1Q9UJU2 399 aaPredicted RBP18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 POLR2AP24928 1970 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-207ENST00000538548 SLC1A7O00341 560 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 PPP6CO00743 305 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 TSPAN1O60635 241 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 SOAT2O75908 522 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 CHRNA1P02708 482 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 GRK3P35626 688 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 MRPL19P49406 292 aaKnown RBP18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 OR4D2P58180 307 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 MAPK11Q15759 364 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 GPR158Q5T848 1215 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 NAT16Q8N8M0 369 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 PJA1Q8NG27 643 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 CELF6Q96J87 481 aaKnown RBP18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 SPATA33Q96N06 139 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 MBOAT4Q96T53 435 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 DUSP16Q9BY84 665 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 HOXD1Q9GZZ0 328 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 SPC25Q9HBM1 224 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 ENTPD7Q9NQZ7 604 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 POLE4Q9NR33 117 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 PCDHGB1Q9Y5G3 927 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 PMF1-BGLAPU3KQ54 211 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 G3V2T6 193 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 RGS13O14921 159 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 AXIN1O15169 862 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 WISP3O95389 354 aaPredicted RBP18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 ADRA1AP35348 466 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 ZNF135P52742 658 aaPredicted RBP18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 IFITM2Q01629 132 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 EMX2Q04743 252 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 FAM98BQ52LJ0 330 aaKnown RBP18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 ZNF484Q5JVG2 852 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 LAIR2Q6ISS4 152 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 TMEM199Q8N511 208 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 BEST2Q8NFU1 509 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 GLMNQ92990 594 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 AMBRA1Q9C0C7 1298 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 ANKRD12Q6UB98 2062 aa18.47■□□□□ 0.55
SFSWAP-207ENST00000538548 PSMD11O00231 422 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 C1RP00736 705 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 FYNP06241 537 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 LINC00032P0C843 101 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 AGXTP21549 392 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 PIGAP37287 484 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 MTHFRP42898 656 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 PPP5CP53041 499 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 ACOX1Q15067 660 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 TMEM207Q6UWW9 146 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 RBM23Q86U06 439 aaKnown RBP18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 GLOD4Q9HC38 313 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 SLAMF8Q9P0V8 285 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 AKT3Q9Y243 479 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 ISPDA4D126 451 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 CCDC154A6NI56 674 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 ZFP36L2P47974 494 aaKnown RBP18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 GEMP55040 296 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 ZBTB6Q15916 424 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms