RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 HDAC3O15379 428 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 TSPAN12O95859 305 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 RBP1P09455 135 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 ALOX15P16050 662 aaPredicted RBP14.02□□□□□ -0.17
ACTN1-205ENST00000538545 PRDX3P30048 256 aaKnown RBP14.02□□□□□ -0.17
ACTN1-205ENST00000538545 CREB5Q02930 508 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 UBE3AQ05086 875 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 NFATC2Q13469 925 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 CARD16Q5EG05 197 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 ARSIQ5FYB1 569 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 DET1Q7L5Y6 550 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 CUZD1Q86UP6 607 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 CACUL1Q86Y37 369 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 DNAJC28Q9NX36 388 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 B4GALT6Q9UBX8 382 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 RIMKLBQ9ULI2 386 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 ITM2BQ9Y287 266 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 TNRC18O15417 2968 aaPredicted RBP14.02□□□□□ -0.17
ACTN1-205ENST00000538545 DOCK9Q9BZ29 2069 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 CAPN8A6NHC0 703 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 PRRT4C9JH25 899 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 GSC2O15499 205 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 ECI2O75521 394 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 CALB2P22676 271 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 TTPAP49638 278 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 HK3P52790 923 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 SH3BP2P78314 561 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 MXRA7P84157 204 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 PRKAA1Q13131 559 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 E2F5Q15329 346 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 RALGPS1Q5JS13 557 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 ZNF678Q5SXM1 525 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 ZNF648Q5T619 568 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-205ENST00000538545 NPAS3Q8IXF0 933 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 FGF13Q92913 245 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 BTBD10Q9BSF8 475 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 BRD9Q9H8M2 597 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 SEMA4BQ9NPR2 832 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-205ENST00000538545 RNF112Q9ULX5 631 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 ERVW-1Q9UQF0 538 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-205ENST00000538545 H0Y3Z8 333 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 CCDC22O60826 627 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 POLR2EP19388 210 aaKnown RBP14.01□□□□□ -0.17
ACTN1-205ENST00000538545 SUOXP51687 545 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 ATP13A5Q4VNC0 1218 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 UGT3A1Q6NUS8 523 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 ELMSAN1Q6PJG2 1045 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 TEX9Q8N6V9 391 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 TRPC4APQ8TEL6 797 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 MRGPRX3Q96LB0 322 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 HACD3Q9P035 362 aa14.01□□□□□ -0.17
ACTN1-205ENST00000538545 GLYATL1P3A0A0U1RQE8 302 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 TULP3O75386 442 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 HNRNPA1P09651 372 aaKnown RBP eCLIP14□□□□□ -0.17
ACTN1-205ENST00000538545 CACNG1Q06432 222 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 AGAP11Q8TF27 550 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 WDR60Q8WVS4 1066 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 FUBP1Q96AE4 644 aaKnown RBP14□□□□□ -0.17
ACTN1-205ENST00000538545 DENND2DQ9H6A0 471 aaPredicted RBP14□□□□□ -0.17
ACTN1-205ENST00000538545 FBRSL1Q9HCM7 1045 aaKnown RBP14□□□□□ -0.17
ACTN1-205ENST00000538545 CRLS1Q9UJA2 301 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 TRMT6Q9UJA5 497 aaKnown RBP14□□□□□ -0.17
ACTN1-205ENST00000538545 H7C0S8 307 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 HOXA9P31269 272 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 BTKQ06187 659 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 PTRHD1Q6GMV3 140 aaKnown RBP14□□□□□ -0.17
ACTN1-205ENST00000538545 SCIMPQ6UWF3 145 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 FRMD7Q6ZUT3 714 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 C3orf30Q96M34 536 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 LENG8Q96PV6 779 aaPredicted RBP14□□□□□ -0.17
ACTN1-205ENST00000538545 P2RY12Q9H244 342 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 LNPEPQ9UIQ6 1025 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 PLA2G4CQ9UP65 541 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 RWDD3Q9Y3V2 267 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 VPS26AO75436 327 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 ATP5HO75947 161 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 GUCA1CO95843 209 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 DDX6P26196 483 aaKnown RBP eCLIP14□□□□□ -0.17
ACTN1-205ENST00000538545 EEF1DP29692 281 aaKnown RBP14□□□□□ -0.17
ACTN1-205ENST00000538545 DGKGP49619 791 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 CLCN7P51798 805 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 KPNA2P52292 529 aaKnown RBP14□□□□□ -0.17
ACTN1-205ENST00000538545 ERVK-21P61565 698 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 GRM2Q14416 872 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 KRT72Q14CN4 511 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 CYHR1Q6ZMK1 362 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 LCA5Q86VQ0 697 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 FRS2Q8WU20 508 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 INPP5DQ92835 1189 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 SCRN2Q96FV2 425 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 CDK15Q96Q40 435 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 THTPAQ9BU02 230 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 ZDHHC7Q9NXF8 308 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 TAGLN3Q9UI15 199 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 SARDHQ9UL12 918 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 OAS3Q9Y6K5 1087 aaKnown RBP14□□□□□ -0.17
ACTN1-205ENST00000538545 WASF2Q9Y6W5 498 aa14□□□□□ -0.17
ACTN1-205ENST00000538545 KIF26AQ9ULI4 1882 aaPredicted RBP13.99□□□□□ -0.17
ACTN1-205ENST00000538545 PRMT5O14744 637 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms