RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 ECHDC3Q96DC8 303 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 FEM1CQ96JP0 617 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 EXOC2Q96KP1 924 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 KLHL32Q96NJ5 620 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 VAT1Q99536 393 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 FERMT1Q9BQL6 677 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 SPATA9Q9BWV2 254 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 TLR10Q9BXR5 811 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 FRMD8P1Q9BZ68 369 aaPredicted RBP5.97□□□□□ -1.45
DDB1-210ENST00000538129 POLR1EQ9GZS1 481 aaKnown RBP5.97□□□□□ -1.45
DDB1-210ENST00000538129 KLHL25Q9H0H3 589 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 EPN3Q9H201 632 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 NOD2Q9HC29 1040 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 PREBQ9HCU5 417 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 CD93Q9NPY3 652 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 VPS45Q9NRW7 570 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 KCND1Q9NSA2 647 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 NCDNQ9UBB6 729 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 SERGEFQ9UGK8 458 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 GPR160Q9UJ42 338 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 PILRBQ9UKJ0 227 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 PCDHB10Q9UN67 800 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 PACSIN2Q9UNF0 486 aaPredicted RBP5.97□□□□□ -1.45
DDB1-210ENST00000538129 ATP8A1Q9Y2Q0 1164 aa5.97□□□□□ -1.45
DDB1-210ENST00000538129 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.97□□□□□ -1.45
DDB1-210ENST00000538129 TNRC6BQ9UPQ9 1833 aaKnown RBP5.97□□□□□ -1.45
DDB1-210ENST00000538129 CEP250Q9BV73 2442 aa5.96□□□□□ -1.45
DDB1-210ENST00000538129 CFAP69A5D8W1 941 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 PRR5-ARHGAP8B1AHC4 643 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 KCNK1O00180 336 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 PLK4O00444 970 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 TRAFD1O14545 582 aaPredicted RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 KCNK3O14649 394 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 AREL1O15033 823 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 SHOXO15266 292 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 HTRA2O43464 458 aaPredicted RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 LATO43561 262 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 SOCS5O75159 536 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 NEBLO76041 1014 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 IGHV4-34P06331 123 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 SERPINF2P08697 491 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 ZNF806P0C7X5 589 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 RBP3P10745 1247 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 GNSP15586 552 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 XPAP23025 273 aaPredicted RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 NFKBIAP25963 317 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 CD27P26842 260 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 SEPHS1P49903 392 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 CDKN1CP49918 316 aaPredicted RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 METAP1P53582 386 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 EIF3EP60228 445 aaKnown RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 RPL26P61254 145 aaKnown RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 RPS21P63220 83 aaKnown RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 OTUD4Q01804 1114 aaKnown RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 CREB5Q02930 508 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 WASHC5Q12768 1159 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 KLF1Q13351 362 aaPredicted RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 NOMO1Q15155 1222 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 CSRP2Q16527 193 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 LPAL2Q16609 132 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 C21orf62-AS1Q17RA5 79 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 POM121L1PQ3SYA9 428 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 SLC45A4Q5BKX6 768 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 ZC3H12BQ5HYM0 836 aaKnown RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 ZNF569Q5MCW4 686 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 CFAP58Q5T655 872 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 SEL1L2Q5TEA6 688 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 DCAF12L1Q5VU92 463 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 KIAA1161Q6NSJ0 714 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 AADACL2Q6P093 401 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 ERAP2Q6P179 960 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 DARS2Q6PI48 645 aaKnown RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 PARS2Q7L3T8 475 aaKnown RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 PRPF39Q86UA1 669 aaKnown RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 ZC3H18Q86VM9 953 aaKnown RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 TRIM69Q86WT6 500 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 SLC13A5Q86YT5 568 aaPredicted RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 NDUFAF2Q8N183 169 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 DEFB119Q8N690 84 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 CNTD1Q8N815 330 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 ARRDC2Q8TBH0 407 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 ACTL9Q8TC94 416 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 HTR3CQ8WXA8 447 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 ASB12Q8WXK4 309 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 PIGKQ92643 395 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 BIRC7Q96CA5 298 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 HAUS1Q96CS2 278 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 MFSD3Q96ES6 412 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 IMP4Q96G21 291 aaKnown RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 PBKQ96KB5 322 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 TEKT5Q96M29 485 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 SEMA3CQ99985 751 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 HERPUD2Q9BSE4 406 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 SLC25A51Q9H1U9 297 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 ARRDC1-AS1Q9H2J1 176 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 C6orf106Q9H6K1 298 aaPredicted RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 NT5MQ9NPB1 228 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 C19orf73Q9NVV2 129 aa5.96□□□□□ -1.46
DDB1-210ENST00000538129 TRMT1Q9NXH9 659 aaKnown RBP5.96□□□□□ -1.46
DDB1-210ENST00000538129 SUSD2Q9UGT4 822 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms