RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 TOP3AQ13472 1001 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 ZIK1Q3SY52 487 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 ERAP2Q6P179 960 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 UTS2BQ765I0 119 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 STRA8Q7Z7C7 330 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 XYLT1Q86Y38 959 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 GIPC2Q8TF65 315 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 ATXN7L3BQ96GX2 97 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 MAP6Q96JE9 813 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 ZNF717Q9BY31 904 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 TASP1Q9H6P5 420 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 CAB39LQ9H9S4 337 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 TNFSF13BQ9Y275 285 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 SCN10AQ9Y5Y9 1956 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 MAGEB16A2A368 324 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 PDZK1P1A8MUH7 402 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 TSPAN1O60635 241 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 POLBP06746 335 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 KRT19P08727 400 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 MSL3P1P0C860 447 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 S100A5P33763 92 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 PRPSAP1Q14558 356 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 SMAD1Q15797 465 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 CYP51A1Q16850 503 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 BRSK2Q8IWQ3 736 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 TMEM130Q8N3G9 435 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 RAET1EQ8TD07 263 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 ZNF296Q8WUU4 475 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 TMEM40Q8WWA1 233 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 PROX1Q92786 737 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 KCTD14Q9BQ13 255 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 AIFM2Q9BRQ8 373 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 KATNAL1Q9BW62 490 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 ASPSCR1Q9BZE9 553 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 LHX5Q9H2C1 402 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 TRIM39Q9HCM9 518 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 ATP13A2Q9NQ11 1180 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 PAK1IP1Q9NWT1 392 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 CYTH4Q9UIA0 394 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 CPSF3Q9UKF6 684 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 FBXO5Q9UKT4 447 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 DSEQ9UL01 958 aa11.3□□□□□ -0.6
SEMA4D-221ENST00000537934 SMIM35A0A1B0GVV1 85 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 C17orf102A2RUQ5 167 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 ARPC2O15144 300 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 TSPAN9O75954 239 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 CXCL8P10145 99 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 HTR3AP46098 478 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 OR3A3P47888 321 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 ALDH3A2P51648 485 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 VBP1P61758 197 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 PIGFQ07326 219 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 FXNQ16595 210 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 FAM187BQ17R55 369 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 IMPG1Q17R60 797 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 SPANXN3Q5MJ09 141 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 LYPD8Q6UX82 237 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 STRADAQ7RTN6 431 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 FAM109AQ8N4B1 249 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 CHDHQ8NE62 594 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 PEX13Q92968 403 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 NODALQ96S42 347 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 BDH2Q9BUT1 245 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 C12orf4Q9NQ89 552 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 ANKRD6Q9Y2G4 727 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 WBP11Q9Y2W2 641 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 BBIP1A8MTZ0 92 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 SHOXO15266 292 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 NPHS1O60500 1241 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 MYCP01106 439 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 ASGR1P07306 291 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 UMPSP11172 480 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 DDOSTP39656 456 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 GDPD3Q7L5L3 318 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 METTL4Q8N3J2 472 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 CADM2Q8N3J6 435 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 PCDH19Q8TAB3 1148 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 STYXQ8WUJ0 223 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 ZNF300Q96RE9 604 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 LRRC4Q9HBW1 653 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 SYTL2Q9HCH5 934 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 DIABLOQ9NR28 239 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 AASDHPPTQ9NRN7 309 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 CISHQ9NSE2 258 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 SYBUQ9NX95 663 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 PCDHGB1Q9Y5G3 927 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 TCRBV5S2A0A599 114 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 SNTNA6NMZ2 147 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 hCG_2039718K7EN88 272 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 INPP4BO15327 924 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 PRPSAP2O60256 369 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 THRBP10828 461 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 ACVR2AP27037 513 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 ZNF143P52747 638 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 ARSFP54793 590 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 OR2B6P58173 313 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 LSM3P62310 102 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 GPLD1P80108 840 aa11.29□□□□□ -0.6
SEMA4D-221ENST00000537934 ACOX1Q15067 660 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms