RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ALDH3A2P51648 485 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 BMXP51813 675 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 FOXA1P55317 472 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 EMX2Q04743 252 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 EPS8Q12929 822 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 DAG1Q14118 895 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 NR1D2Q14995 579 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 RGS21Q2M5E4 152 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 NOMO2Q5JPE7 1267 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 CPNE9Q8IYJ1 553 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 TMEM199Q8N511 208 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 OR6P1Q8NGX9 317 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 EXT2Q93063 718 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 ABCC13Q9NSE7 274 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 RIC8BQ9NVN3 520 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 GIMAP2Q9UG22 337 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 ITGB1BP2Q9UKP3 347 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 PSME2Q9UL46 239 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 GIT1Q9Y2X7 761 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 PTGDR2Q9Y5Y4 395 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 PTPRDP23468 1912 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 ASPDHA6ND91 283 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 CCDC154A6NI56 674 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 C16orf96A6NNT2 1141 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 MEIS3P2A8K0S8 358 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 E9PAM4 449 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 K7EPI3 171 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 DEAF1O75398 565 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-218ENST00000537641 DNAJB5O75953 348 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 CLPXO76031 633 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 PEX11BO96011 259 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 CYBBP04839 570 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 THRBP10828 461 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 MTHFD2P13995 350 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 CHRM3P20309 590 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 CDH3P22223 829 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 HRH2P25021 359 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 GSTM2P28161 218 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 ZFP36L2P47974 494 aaKnown RBP12.07□□□□□ -0.48
CPSF7-218ENST00000537641 ARSFP54793 590 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 CLCQ05315 142 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 TRAF2Q12933 501 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 SKIV2LQ15477 1246 aaKnown RBP12.07□□□□□ -0.48
CPSF7-218ENST00000537641 GNASQ5JWF2 1037 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 PIM3Q86V86 326 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 IFNL1Q8IU54 200 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 RIMKLAQ8IXN7 391 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 TTC30BQ8N4P2 665 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 TRPV1Q8NER1 839 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 SNX19Q92543 992 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 HDAC2Q92769 488 aaKnown RBP12.07□□□□□ -0.48
CPSF7-218ENST00000537641 TADA1Q96BN2 335 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 BIRC7Q96CA5 298 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 FCRL2Q96LA5 508 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-218ENST00000537641 NSMCE2Q96MF7 247 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 GAD1Q99259 594 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 C1QTNF3Q9BXJ4 246 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 FANCEQ9HB96 536 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 ZFYVE28Q9HCC9 887 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 SYTL2Q9HCH5 934 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 NDFIP2Q9NV92 336 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 MARCH4Q9P2E8 410 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-218ENST00000537641 RIMKLBQ9ULI2 386 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 PCDHB3Q9Y5E6 796 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 MYO16Q9Y6X6 1858 aa12.07□□□□□ -0.48
CPSF7-218ENST00000537641 FAM234BA2RU67 622 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 ARL5CA6NH57 179 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 KPNA4O00629 521 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 STX16O14662 325 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 FOXD2O60548 495 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 CRCPO75575 148 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 SIX3O95343 332 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 CHEK2O96017 543 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 SLC4A1P02730 911 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 FUCA1P04066 466 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 NCK1P16333 377 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 ZNF182P17025 639 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 MATN1P21941 496 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 IGFBP6P24592 240 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 CD86P42081 329 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 CCR3P51677 355 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 ARSDP51689 593 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 CLCNKBP51801 687 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 GSTM4Q03013 218 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 TOP3AQ13472 1001 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 OR4D1Q15615 310 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 PFKFB4Q16877 469 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 XKR7Q5GH72 579 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 RABL3Q5HYI8 236 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 TTC23Q5W5X9 447 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 FAM219BQ5XKK7 198 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 ANKS6Q68DC2 871 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 GDF6Q6KF10 455 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 MRNIPQ6NTE8 343 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 FAM171BQ6P995 826 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 LINC00299Q6ZSB3 139 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 NCCRP1Q6ZVX7 275 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 KDELC2Q7Z4H8 507 aa12.06□□□□□ -0.48
CPSF7-218ENST00000537641 MRPL10Q7Z7H8 261 aaKnown RBP12.06□□□□□ -0.48
CPSF7-218ENST00000537641 SERINC5Q86VE9 423 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms