RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CLPTM1LQ96KA5 538 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 CPEB1Q9BZB8 566 aaKnown RBP13.48□□□□□ -0.25
SMG6-203ENST00000536871 TBC1D14Q9P2M4 693 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 HS3ST2Q9Y278 367 aa13.48□□□□□ -0.25
SMG6-203ENST00000536871 CAPN8A6NHC0 703 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 TMEM233B4DJY2 109 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 CDK14O94921 469 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 HOXA9P31269 272 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 MRPL19P49406 292 aaKnown RBP13.47□□□□□ -0.25
SMG6-203ENST00000536871 UBE3AQ05086 875 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 CLCQ05315 142 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 PTK2BQ14289 1009 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 FASTKQ14296 549 aaKnown RBP13.47□□□□□ -0.25
SMG6-203ENST00000536871 GEN1Q17RS7 908 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 GPSM1Q86YR5 675 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 TMEM126BQ8IUX1 230 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 BBS7Q8IWZ6 715 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 PIANPQ8IYJ0 282 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 PCDH20Q8N6Y1 951 aaKnown RBP13.47□□□□□ -0.25
SMG6-203ENST00000536871 KIAA1958Q8N8K9 716 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 OR56A4Q8NGH8 313 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 CD200R1Q8TD46 325 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 ZFAND2BQ8WV99 257 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 FUBP1Q96AE4 644 aaKnown RBP13.47□□□□□ -0.25
SMG6-203ENST00000536871 OTUB2Q96DC9 234 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 MOCOSQ96EN8 888 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 PPP1R36Q96LQ0 422 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 ZNF641Q96N77 438 aaPredicted RBP13.47□□□□□ -0.25
SMG6-203ENST00000536871 OSBPL1AQ9BXW6 950 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 MID1IP1Q9NPA3 183 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 SLC25A13Q9UJS0 675 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 LRCH1Q9Y2L9 728 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 PPIL1Q9Y3C6 166 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 ANAPC1Q9H1A4 1944 aa13.47□□□□□ -0.25
SMG6-203ENST00000536871 TRBV5-4A0A0C4DH59 114 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 BTN3A1O00481 513 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 ECI2O75521 394 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 CRCPO75575 148 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 FGBP02675 491 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 JUNP05412 331 aaKnown RBP13.46□□□□□ -0.25
SMG6-203ENST00000536871 SNRPB2P08579 225 aaKnown RBP13.46□□□□□ -0.25
SMG6-203ENST00000536871 TCF3P15923 654 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 PKNOX1P55347 436 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 C1QTNF8P60827 252 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 ZXDBP98169 803 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 BLMHQ13867 455 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 GSTA3Q16772 222 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 UGT3A2Q3SY77 523 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 MMEL1Q495T6 779 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 SPATS1Q496A3 300 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 SETMARQ53H47 684 aaPredicted RBP13.46□□□□□ -0.25
SMG6-203ENST00000536871 CTSL3PQ5NE16 218 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 ATXN7L2Q5T6C5 722 aaPredicted RBP13.46□□□□□ -0.25
SMG6-203ENST00000536871 PTRHD1Q6GMV3 140 aaKnown RBP13.46□□□□□ -0.25
SMG6-203ENST00000536871 USP45Q70EL2 814 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 LYSMD3Q7Z3D4 306 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 SPATA19Q7Z5L4 167 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 APCDD1Q8J025 514 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 KLHL23Q8NBE8 558 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 PCYOX1LQ8NBM8 494 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 KCNV2Q8TDN2 545 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 ROPN1LQ96C74 230 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 RCN3Q96D15 328 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 LINGO1Q96FE5 620 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 ZBED2Q9BTP6 218 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 WDR41Q9HAD4 459 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 NMRK1Q9NWW6 199 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 EPS15L1Q9UBC2 864 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 DPP7Q9UHL4 492 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 SARDHQ9UL12 918 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 ANKRD36A6QL64 1941 aa13.46□□□□□ -0.25
SMG6-203ENST00000536871 C1orf232A0A0U1RR37 186 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 A0A1W2PRU2 124 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 TTC36A6NLP5 189 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 EIF3FO00303 357 aaPredicted RBP13.46□□□□□ -0.26
SMG6-203ENST00000536871 UBFD1O14562 309 aaKnown RBP13.46□□□□□ -0.26
SMG6-203ENST00000536871 PRAMEF1O95521 474 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 ESRRBO95718 433 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 S100BP04271 92 aaPredicted RBP13.46□□□□□ -0.26
SMG6-203ENST00000536871 UROSP10746 265 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 PTPN2P17706 415 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 ME2P23368 584 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 DGKAP23743 735 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 EEF1DP29692 281 aaKnown RBP13.46□□□□□ -0.26
SMG6-203ENST00000536871 SPAM1P38567 509 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 RPS6KA3P51812 740 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 POLR2LP62875 67 aaKnown RBP13.46□□□□□ -0.26
SMG6-203ENST00000536871 SH3BP2P78314 561 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 TSNQ15631 228 aaKnown RBP13.46□□□□□ -0.26
SMG6-203ENST00000536871 TTLL9Q3SXZ7 439 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 PIGGQ5H8A4 983 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 COQ5Q5HYK3 327 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 PITRM1Q5JRX3 1037 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 TMEM198Q66K66 360 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 OGFOD2Q6N063 350 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 TTC23LQ6PF05 361 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 ELMSAN1Q6PJG2 1045 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 CAMK1DQ8IU85 385 aa13.46□□□□□ -0.26
SMG6-203ENST00000536871 ZNF784Q8NCA9 323 aaPredicted RBP13.46□□□□□ -0.26
SMG6-203ENST00000536871 WFDC5Q8TCV5 224 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms