RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 TINAGQ9UJW2 476 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 ACSL5Q9ULC5 683 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 SNX9Q9Y5X1 595 aa5.38□□□□□ -1.55
PRKDC-208ENST00000536710 GPR75-ASB3A0A0A6YYF3 556 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 DNAJC9-AS1A6NH13 148 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 IPO8O15397 1037 aaKnown RBP5.37□□□□□ -1.55
PRKDC-208ENST00000536710 DIAPH2O60879 1101 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 VPREB1P12018 145 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 HOXD3P31249 432 aaPredicted RBP5.37□□□□□ -1.55
PRKDC-208ENST00000536710 CXCL9Q07325 125 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 SNTB1Q13884 538 aaKnown RBP5.37□□□□□ -1.55
PRKDC-208ENST00000536710 AMZ1Q400G9 498 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 KCNT1Q5JUK3 1230 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 PAPPA-AS1Q5QFB9 102 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 FRG2Q64ET8 278 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 KRT77Q7Z794 578 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 FJX1Q86VR8 437 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 FOXRED2Q8IWF2 684 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 RASGEF1CQ8N431 466 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 PCDH20Q8N6Y1 951 aaKnown RBP5.37□□□□□ -1.55
PRKDC-208ENST00000536710 PTPMT1Q8WUK0 201 aaPredicted RBP5.37□□□□□ -1.55
PRKDC-208ENST00000536710 VPS33AQ96AX1 596 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 ZNF653Q96CK0 615 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 CMKLR1Q99788 373 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 SEMA3CQ99985 751 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 SF3B5Q9BWJ5 86 aaKnown RBP5.37□□□□□ -1.55
PRKDC-208ENST00000536710 DCLK3Q9C098 648 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 TMEM39BQ9GZU3 492 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 EBF3Q9H4W6 596 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 NOX4Q9NPH5 578 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 AMACRQ9UHK6 382 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 LOXL2Q9Y4K0 774 aa5.37□□□□□ -1.55
PRKDC-208ENST00000536710 CPT2P23786 658 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 CDC25AP30304 524 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 AMTP48728 403 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 HNRNPH2P55795 449 aaKnown RBP5.36□□□□□ -1.55
PRKDC-208ENST00000536710 TAS2R38P59533 333 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 ABATP80404 500 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 DDR1Q08345 913 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 MEP1AQ16819 746 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 FAM98BQ52LJ0 330 aaKnown RBP5.36□□□□□ -1.55
PRKDC-208ENST00000536710 TCP11X2Q5H9J9 407 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 KRT80Q6KB66 452 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 RGMBQ6NW40 437 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 DLK2Q6UY11 383 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 FAM47EQ6ZV65 393 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 HAUS6Q7Z4H7 955 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 VSIG1Q86XK7 387 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 GUF1Q8N442 669 aaKnown RBP5.36□□□□□ -1.55
PRKDC-208ENST00000536710 OR2AK2Q8NG84 335 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 ASB5Q8WWX0 329 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 WASF1Q92558 559 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 RMDN1Q96DB5 314 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 CSF3RQ99062 836 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 SPATC1LQ9H0A9 340 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 SLCO5A1Q9H2Y9 848 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 MMP27Q9H306 513 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 SH3GLB2Q9NR46 395 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 WDR35Q9P2L0 1181 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 ANAPC2Q9UJX6 822 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 KLHL20Q9Y2M5 609 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 ZNF521Q96K83 1311 aa5.36□□□□□ -1.55
PRKDC-208ENST00000536710 TRBC2A0A5B9 178 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 LINC01553A4QN01 128 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 H0YIN7 160 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 ZBTB43O43298 467 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 TBX10O75333 385 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 MOSPD3O75425 235 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 HSPA4LO95757 839 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 CRYABP02511 175 aaKnown RBP5.35□□□□□ -1.55
PRKDC-208ENST00000536710 PRLRP16471 622 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 SPOCK1Q08629 439 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 CAMK2DQ13557 499 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 ALCAMQ13740 583 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 IL11RAQ14626 422 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 DAB2IPQ5VWQ8 1189 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 DHRS7BQ6IAN0 325 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-208ENST00000536710 INTS8Q75QN2 995 aaKnown RBP5.35□□□□□ -1.55
PRKDC-208ENST00000536710 IRF2BP2Q7Z5L9 587 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 LDB1Q86U70 411 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-208ENST00000536710 GPR180Q86V85 440 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 FBXO39Q8N4B4 442 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 EMC1Q8N766 993 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 PRR26Q8N8Z3 221 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 TDRD5Q8NAT2 981 aaKnown RBP5.35□□□□□ -1.55
PRKDC-208ENST00000536710 TEKT4Q8WW24 435 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 ADAMTS14Q8WXS8 1223 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 TAAR8Q969N4 342 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 RHBDF1Q96CC6 855 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 MTBPQ96DY7 904 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 HMCESQ96FZ2 354 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 SLC25A33Q9BSK2 321 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 HGH1Q9BTY7 390 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 KCNK15Q9H427 330 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 GOLPH3LQ9H4A5 285 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 LARSQ9P2J5 1176 aaKnown RBP5.35□□□□□ -1.55
PRKDC-208ENST00000536710 FBXL2Q9UKC9 423 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 MYO6Q9UM54 1294 aa5.35□□□□□ -1.55
PRKDC-208ENST00000536710 B3GALT5Q9Y2C3 310 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms