RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 ZBTB14O43829 449 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 PGM3O95394 542 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 BDNFP23560 247 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 MAGEA11P43364 429 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 RPL34P49207 117 aaKnown RBP11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 TRAP1Q12931 704 aaKnown RBP11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 STX5Q13190 355 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 APOFQ13790 326 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 CCINQ13939 588 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 PAFAH1B3Q15102 231 aaKnown RBP11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 NADK2Q4G0N4 442 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 SLC9B1Q4ZJI4 515 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 ZNF362Q5T0B9 420 aaPredicted RBP11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 PKN3Q6P5Z2 889 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 TTC16Q8NEE8 873 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 P2RY11Q96G91 374 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 TRMT2BQ96GJ1 504 aaKnown RBP11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 FUBP3Q96I24 572 aaKnown RBP eCLIP11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 CDRT15Q96T59 188 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 VAT1Q99536 393 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 WDR41Q9HAD4 459 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 LRRC4Q9HBW1 653 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 MRM3Q9HC36 420 aaKnown RBP11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 FBRSL1Q9HCM7 1045 aaKnown RBP11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 PARD6AQ9NPB6 346 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 DDX18Q9NVP1 670 aaKnown RBP11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 SYBUQ9NX95 663 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 SELENONQ9NZV5 590 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 UXTQ9UBK9 157 aaPredicted RBP11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 ZMYM5Q9UJ78 669 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 TRHDEQ9UKU6 1024 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 FZD10Q9ULW2 581 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 N6AMT1Q9Y5N5 214 aa11.58□□□□□ -0.56
CHRNB1-202ENST00000536404 C2orf78A6NCI8 922 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 SOBPA7XYQ1 873 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 MAGEB3O15480 346 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 AP2A1O95782 977 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 OCM2P0CE71 109 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 OCMP0CE72 109 aaPredicted RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ENDOUP21128 410 aaKnown RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 CDH3P22223 829 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 TGM1P22735 817 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 GNL1P36915 607 aaPredicted RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 GRIA1P42261 906 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 PSMD8P48556 350 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 PCYT1AP49585 367 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 FOXK2Q01167 660 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 DMPKQ09013 629 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 SUZ12Q15022 739 aaKnown RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 RSPO4Q2I0M5 234 aaPredicted RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 PPP1R26Q5T8A7 1209 aaPredicted RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 VWA5B1Q5TIE3 1220 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 FSTL4Q6MZW2 842 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ERMP1Q7Z2K6 904 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 TMEM135Q86UB9 458 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 TTC30AQ86WT1 665 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ARL14EPQ8N8R7 260 aaPredicted RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ANKRD52Q8NB46 1076 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ZNF669Q96BR6 464 aaPredicted RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 CNBD2Q96M20 576 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 GATA5Q9BWX5 397 aaPredicted RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 MRPL1Q9BYD6 325 aaKnown RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 NUF2Q9BZD4 464 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 SNX25Q9H3E2 840 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 C8orf4Q9NR00 106 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 POLR3BQ9NW08 1133 aaPredicted RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 SUCOQ9UBS9 1254 aaKnown RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 RSL24D1Q9UHA3 163 aaKnown RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 VANGL2Q9ULK5 521 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 STAP1Q9ULZ2 295 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 USP3Q9Y6I4 520 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 GREB1Q4ZG55 1949 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ANAPC1Q9H1A4 1944 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 TRAV19A0A0A6YYK7 116 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 IDH3BO43837 385 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 NPHS1O60500 1241 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 PAPSS2O95340 614 aaPredicted RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 TOP3BO95985 862 aaKnown RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ERVK-10P10266 1014 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ZNF23P17027 643 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 HMOX2P30519 316 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 GRIK1P39086 918 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 MATKP42679 507 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 MRPS22P82650 360 aaKnown RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 TXNL4AP83876 142 aaKnown RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ILF2Q12905 390 aaKnown RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 SLC12A1Q13621 1099 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 PRPSAP1Q14558 356 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 SLC25A52Q3SY17 297 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 RAB6CQ53S08 254 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 TMEM196Q5HYL7 178 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 PPM1JQ5JR12 505 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 PRR23BQ6ZRT6 265 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 PID1Q7Z2X4 250 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 SCUBE3Q8IX30 993 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 TRIML2Q8N7C3 387 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 BHLHE22Q8NFJ8 381 aaPredicted RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 OR6B3Q8NGW1 331 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 HM13Q8TCT9 377 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ASB9Q96DX5 294 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms