RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 CRLS1Q9UJA2 301 aa15.45■□□□□ 0.06
CNN1-202ENST00000535659 CEP192Q8TEP8 1941 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 TLR4O00206 839 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 CACNB4O00305 520 aaPredicted RBP15.44■□□□□ 0.06
CNN1-202ENST00000535659 GPR39O43194 453 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 WNT1P04628 370 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 PRSS56P0CW18 603 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 THEGLP0DJG4 465 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 ERVK-10P10266 1014 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 PPARGP37231 505 aaPredicted RBP15.44■□□□□ 0.06
CNN1-202ENST00000535659 AFF3P51826 1226 aaKnown RBP15.44■□□□□ 0.06
CNN1-202ENST00000535659 LDLRAP1Q5SW96 308 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 LYPLAL1Q5VWZ2 237 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 MRNIPQ6NTE8 343 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 TRMT10BQ6PF06 316 aaKnown RBP15.44■□□□□ 0.06
CNN1-202ENST00000535659 CERS6Q6ZMG9 384 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 SERPINA9Q86WD7 417 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 DCP2Q8IU60 420 aaKnown RBP15.44■□□□□ 0.06
CNN1-202ENST00000535659 LMNTD2Q8IXW0 634 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 NXPE1Q8N323 547 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 GABPB2Q8TAK5 448 aaPredicted RBP15.44■□□□□ 0.06
CNN1-202ENST00000535659 GDAP1Q8TB36 358 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 CALML6Q8TD86 181 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 AENQ8WTP8 325 aaKnown RBP15.44■□□□□ 0.06
CNN1-202ENST00000535659 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.44■□□□□ 0.06
CNN1-202ENST00000535659 SKA1Q96BD8 255 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 TTC1Q99614 292 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 TRIM39Q9HCM9 518 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 MARCH4Q9P2E8 410 aaPredicted RBP15.44■□□□□ 0.06
CNN1-202ENST00000535659 ATXN2Q99700 1313 aaKnown RBP15.44■□□□□ 0.06
CNN1-202ENST00000535659 PLXNA2O75051 1894 aa15.44■□□□□ 0.06
CNN1-202ENST00000535659 TCRBV9S1A1TA0A576 114 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 VILLO15195 856 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 MAGEC1O60732 1142 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 MYCLP1P12525 358 aaPredicted RBP15.43■□□□□ 0.06
CNN1-202ENST00000535659 HTR1BP28222 390 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 PHBP35232 272 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 HOXD12P35452 270 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 CSNK1EP49674 416 aaKnown RBP15.43■□□□□ 0.06
CNN1-202ENST00000535659 THOP1P52888 689 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 MGAT5Q09328 741 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 PTK2BQ14289 1009 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 SEMA3AQ14563 771 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 TEAD4Q15561 434 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 SMAD1Q15797 465 aaKnown RBP15.43■□□□□ 0.06
CNN1-202ENST00000535659 AARS2Q5JTZ9 985 aaKnown RBP15.43■□□□□ 0.06
CNN1-202ENST00000535659 GPRC6AQ5T6X5 926 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 PEAR1Q5VY43 1037 aaPredicted RBP15.43■□□□□ 0.06
CNN1-202ENST00000535659 LAIR1Q6GTX8 287 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 ZNF449Q6P9G9 518 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 EMBQ6PCB8 327 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 PHYKPLQ8IUZ5 450 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 TCF12Q99081 682 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 ARFGAP3Q9NP61 516 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 IARS2Q9NSE4 1012 aaKnown RBP15.43■□□□□ 0.06
CNN1-202ENST00000535659 ZDHHC3Q9NYG2 299 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 GON4LQ3T8J9 2241 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 EPN2O95208 641 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 KELP23276 732 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 ACRV1P26436 265 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 PMLP29590 882 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 TTPAP49638 278 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 KIAA1024LP59773 190 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 TMEM115Q12893 351 aaPredicted RBP15.43■□□□□ 0.06
CNN1-202ENST00000535659 PDE1CQ14123 709 aaPredicted RBP15.43■□□□□ 0.06
CNN1-202ENST00000535659 NFATC4Q14934 902 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 DBN1Q16643 649 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 DUOXA1Q1HG43 343 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 TEDDM1Q5T9Z0 273 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 RABEPKQ7Z6M1 372 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 LDB1Q86U70 411 aaPredicted RBP15.43■□□□□ 0.06
CNN1-202ENST00000535659 TRIM74Q86UV6 250 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 CILP2Q8IUL8 1156 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 SLC22A18ASQ8N1D0 253 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 OTUD6BQ8N6M0 293 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 PNPLA1Q8N8W4 532 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 SUMF1Q8NBK3 374 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 DDHD1Q8NEL9 900 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 CEP76Q8TAP6 659 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 FBF1Q8TES7 1133 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 HEXDCQ8WVB3 486 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 SCG3Q8WXD2 468 aaKnown RBP15.43■□□□□ 0.06
CNN1-202ENST00000535659 COPS8Q99627 209 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 FAM167BQ9BTA0 163 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 GPR27Q9NS67 375 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 SMG5Q9UPR3 1016 aaKnown RBP15.43■□□□□ 0.06
CNN1-202ENST00000535659 TMEM98Q9Y2Y6 226 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 PCDHGA5Q9Y5G8 931 aa15.43■□□□□ 0.06
CNN1-202ENST00000535659 ZNF106Q9H2Y7 1883 aaKnown RBP15.42■□□□□ 0.06
CNN1-202ENST00000535659 FANCMQ8IYD8 2048 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 SDK1Q7Z5N4 2213 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 SPTY2D1-AS1A0A0U1RR47 76 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 TMEM202A6NGA9 273 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 PFDN6O15212 129 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 ACSL3O95573 720 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 ASMTLO95671 621 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 OGNP20774 298 aaKnown RBP15.42■□□□□ 0.06
CNN1-202ENST00000535659 STX2P32856 288 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 NBL1P41271 181 aa15.42■□□□□ 0.06
CNN1-202ENST00000535659 C21orf59P57076 290 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms