RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CREB1P16220 341 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 PTPN5P54829 565 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 ADPRHP54922 357 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 WDR4P57081 412 aaKnown RBP12.24□□□□□ -0.45
SCARB1-204ENST00000535005 SEMG2Q02383 582 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 SEPT6Q14141 434 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 ARHGEF7Q14155 803 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 FRG1Q14331 258 aaKnown RBP12.24□□□□□ -0.45
SCARB1-204ENST00000535005 ANKRD20A4Q4UJ75 823 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 FAM91A1Q658Y4 838 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 TMEM154Q6P9G4 183 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 ANKMY2Q8IV38 441 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 DTWD2Q8NBA8 298 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 PPFIBP2Q8ND30 876 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 RNF217Q8TC41 542 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 ZNF778Q96MU6 729 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 SMC6Q96SB8 1091 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 BTBD1Q9H0C5 482 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 PLAC1Q9HBJ0 212 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 RAD18Q9NS91 495 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 NLE1Q9NVX2 485 aaPredicted RBP12.24□□□□□ -0.45
SCARB1-204ENST00000535005 NFKBIL1Q9UBC1 381 aaPredicted RBP12.24□□□□□ -0.45
SCARB1-204ENST00000535005 ZC3H7BQ9UGR2 993 aaKnown RBP12.24□□□□□ -0.45
SCARB1-204ENST00000535005 CHMP2BQ9UQN3 213 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 ITM2BQ9Y287 266 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 KCTD3Q9Y597 815 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 MAGEA13PA6NCF6 341 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 A8MX80 341 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 H7C0S8 307 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 NEMP1O14524 444 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 AXIN1O15169 862 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 STX7O15400 261 aaKnown RBP12.23□□□□□ -0.45
SCARB1-204ENST00000535005 DNAJC6O75061 913 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 C1SP09871 688 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 T-ENOLP0DO92 83 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 SF3A3Q12874 501 aaKnown RBP eCLIP12.23□□□□□ -0.453e-6■■■□□ 15.4
SCARB1-204ENST00000535005 AGERQ15109 404 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 MAP7D1Q3KQU3 841 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 SPANXN3Q5MJ09 141 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 HP1BP3Q5SSJ5 553 aaPredicted RBP12.23□□□□□ -0.45
SCARB1-204ENST00000535005 THEMIS2Q5TEJ8 643 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 ZDHHC20Q5W0Z9 365 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 KIAA1161Q6NSJ0 714 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 CYS1Q717R9 158 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 CYP2U1Q7Z449 544 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 TECPR1Q7Z6L1 1165 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 NLRP8Q86W28 1048 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 C1orf210Q8IVY1 113 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 OR2T34Q8NGX1 318 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 OR14C36Q8NHC7 312 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 DTX3LQ8TDB6 740 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 ASB12Q8WXK4 309 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 C9orf72Q96LT7 481 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 COQ10AQ96MF6 247 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 TRIM4Q9C037 500 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 CDH19Q9H159 772 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 CD93Q9NPY3 652 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 KCTD5Q9NXV2 234 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 WSB2Q9NYS7 404 aaPredicted RBP12.23□□□□□ -0.45
SCARB1-204ENST00000535005 ZFP69BQ9UJL9 534 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 HAO1Q9UJM8 370 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 RPS6KL1Q9Y6S9 549 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 MUC3AQ02505 3323 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 A0A0U1RQS6 177 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 ZCWPW2A0A1B0GU75 182 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 LRRC72A6NJI9 287 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 LAMTOR5O43504 91 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 SPAG6O75602 509 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 ELFN1P0C7U0 828 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 GM2AP17900 193 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 NMBRP28336 390 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 AVPR2P30518 371 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 ACSL1P33121 698 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 HADHAP40939 763 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 SPINT3P49223 89 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 CUL3Q13618 768 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 KRT72Q14CN4 511 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 CCDC6Q16204 474 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 TMEM259Q4ZIN3 620 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 KIAA0930Q6ICG6 404 aaPredicted RBP12.23□□□□□ -0.45
SCARB1-204ENST00000535005 OR52E8Q6IFG1 317 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 ESRP1Q6NXG1 681 aaKnown RBP12.23□□□□□ -0.45
SCARB1-204ENST00000535005 UNC5AQ6ZN44 842 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 HSD11B1LQ7Z5J1 315 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 PALM2Q8IXS6 379 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 NRSN1Q8IZ57 195 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 MAML2Q8IZL2 1156 aaPredicted RBP12.23□□□□□ -0.45
SCARB1-204ENST00000535005 OR4K2Q8NGD2 314 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 OR13J1Q8NGT2 312 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 CXorf40AQ8TE69 158 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 ALKBH8Q96BT7 664 aaKnown RBP12.23□□□□□ -0.45
SCARB1-204ENST00000535005 MFSD3Q96ES6 412 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 FCRL3Q96P31 734 aaPredicted RBP12.23□□□□□ -0.45
SCARB1-204ENST00000535005 C1QTNF2Q9BXJ5 285 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 COL25A1Q9BXS0 654 aaPredicted RBP12.23□□□□□ -0.45
SCARB1-204ENST00000535005 DENND2DQ9H6A0 471 aaPredicted RBP12.23□□□□□ -0.45
SCARB1-204ENST00000535005 NMRK1Q9NWW6 199 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 PKD2L2Q9NZM6 624 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 IL1RAPL1Q9NZN1 696 aa12.23□□□□□ -0.45
SCARB1-204ENST00000535005 FBXO4Q9UKT5 387 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms