RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MPP6Q9NZW5 540 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 PPARGC1AQ9UBK2 798 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 KCTD3Q9Y597 815 aa11.3□□□□□ -0.6
TRAPPC4-213ENST00000533149 UNC13CQ8NB66 2214 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 IGLV3-10A0A075B6K4 115 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 C16orf96A6NNT2 1141 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 WASH4PA8MWX3 477 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 FGF10O15520 208 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 DUX1O43812 170 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 ZNF821O75541 412 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 TM7SF2O76062 418 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 MAP3K6O95382 1288 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 ECEL1O95672 775 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 RNF224P0DH78 156 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 RBP3P10745 1247 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 RHOQP17081 205 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 COL8A1P27658 744 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 IRAK1P51617 712 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 SRP54P61011 504 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 SLC20A2Q08357 652 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 XRCC4Q13426 336 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 TRA2AQ13595 282 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 TCEA2Q15560 299 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 C5orf22Q49AR2 442 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 C2CD3Q4AC94 2353 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 C14orf28Q4W4Y0 310 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 DCAF12Q5T6F0 453 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 DARS2Q6PI48 645 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 ENPP7Q6UWV6 458 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 ASB18Q6ZVZ8 466 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 GSTA5Q7RTV2 222 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 CCDC13Q8IYE1 715 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 NETO2Q8NC67 525 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 AGBL5Q8NDL9 886 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 FAM46DQ8NEK8 389 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 CPT1CQ8TCG5 803 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 GRK7Q8WTQ7 553 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 SLCO2A1Q92959 643 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 RBM15Q96T37 977 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 ZYG11BQ9C0D3 744 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 KLC2Q9H0B6 622 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 ZNF768Q9H5H4 540 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 RDH14Q9HBH5 336 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 SLC39A1Q9NY26 324 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 NEU3Q9UQ49 428 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 B3GALT1Q9Y5Z6 326 aa11.29□□□□□ -0.6
TRAPPC4-213ENST00000533149 ITPR2Q14571 2701 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 IGHV5-10-1A0A0J9YXX1 117 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 MFSD11O43934 449 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 HEXIM1O94992 359 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 GAS8O95995 478 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 TNFP01375 233 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 TCN2P20062 427 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 OAS2P29728 719 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 CSTF2P33240 577 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 ABL2P42684 1182 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 SERPINH1P50454 418 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 CCNHP51946 323 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 RAB15P59190 212 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 B4GALNT1Q00973 533 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 GUCY2DQ02846 1103 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 HLTFQ14527 1009 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 PDK1Q15118 436 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 PPP1R7Q15435 360 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 AMZ1Q400G9 498 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 ALFQ53S48 1182 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 ZNF805Q5CZA5 627 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 SYDE1Q6ZW31 735 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 TAF8Q7Z7C8 310 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 NLRP14Q86W24 1093 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 TP53INP2Q8IXH6 220 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 NLGN4XQ8N0W4 816 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 LZTR1Q8N653 840 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 RTL3Q8N8U3 475 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 RCBTB1Q8NDN9 531 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 NLGN4YQ8NFZ3 816 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 LRRN4Q8WUT4 740 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 ART4Q93070 314 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 PMEPA1Q969W9 287 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 CCDC74BQ96LY2 380 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 TEFMQ96QE5 360 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 ERP44Q9BS26 406 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 TRIM51Q9BSJ1 452 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 TMEM121Q9BTD3 319 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 ZDHHC6Q9H6R6 413 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 MBNL1Q9NR56 388 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 KLQ9UEF7 1012 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 PILRAQ9UKJ1 303 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 ITM2BQ9Y287 266 aa11.28□□□□□ -0.6
TRAPPC4-213ENST00000533149 A0A0D9SEW6 157 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 HACD1B0YJ81 288 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 BHMG1C9JSJ3 638 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 B4GAT1O43505 415 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 MMP20O60882 483 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 KRT14P02533 472 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 ZSCAN5DPP0CG00 497 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 ETS1P14921 441 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 NR1D1P20393 614 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 RBL1P28749 1068 aa11.27□□□□□ -0.61
TRAPPC4-213ENST00000533149 STIP1P31948 543 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms