RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 NATD1Q8N6N6 113 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 RFT1Q96AA3 541 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 MGME1Q9BQP7 344 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 C12orf4Q9NQ89 552 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ASAH2Q9NR71 780 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 SMPD4Q9NXE4 827 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 THUMPD1Q9NXG2 353 aaKnown RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 STOX2Q9P2F5 926 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 MLXQ9UH92 298 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ARPC4-TTLL3A0A0A6YYG9 625 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 RIIAD1A6NNX1 92 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 SPTLC1O15269 473 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 TIPRLO75663 272 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 KRT33AO76009 404 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 IFNW1P05000 195 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 PKMP14618 531 aaKnown RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 SP100P23497 879 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 LIMK2P53671 638 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 CRADDP78560 199 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 GRB14Q14449 540 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 KLHL22Q53GT1 634 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 RNASEH2BQ5TBB1 312 aaKnown RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 PAMR1Q6UXH9 720 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 PLCZ1Q86YW0 608 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 CYP2W1Q8TAV3 490 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 SLC38A4Q969I6 547 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 HDAC10Q969S8 669 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 COL26A1Q96A83 441 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 SIPA1Q96FS4 1042 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 P2RY11Q96G91 374 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ERMAPQ96PL5 475 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 NPAS2Q99743 824 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.56□□□□□ -1.23e-6■□□□□ 9.8
CTNND1-233ENST00000532787 PCDHGC3Q9UN70 934 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 MEMO1Q9Y316 297 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 GRIP1Q9Y3R0 1128 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 RPLP0P05388 317 aaKnown RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 WEE1P30291 646 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 YBEYP58557 167 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ITGA7Q13683 1181 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 IKBKEQ14164 716 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 DPY19L1Q2PZI1 675 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 SPATS1Q496A3 300 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 RBM48Q5RL73 367 aaKnown RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 DCST1Q5T197 706 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ZCCHC12Q6PEW1 402 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 CNSTQ6PJW8 725 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ZNF730Q6ZMV8 503 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 PRR23CQ6ZRP0 262 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ZBTB2Q8N680 514 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 C11orf65Q8NCR3 313 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 TWIST2Q8WVJ9 160 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 OR8D1Q8WZ84 308 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 HAS1Q92839 578 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 DIRAS2Q96HU8 199 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 NODALQ96S42 347 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 KAT8Q9H7Z6 458 aaKnown RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 SGK2Q9HBY8 427 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 SOHLH2Q9NX45 425 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 MIOSQ9NXC5 875 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ZNF224Q9NZL3 707 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 MAT2BQ9NZL9 334 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ZNF490Q9ULM2 529 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 SETD1BQ9UPS6 1966 aaKnown RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ATRNO75882 1429 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 DCCP43146 1447 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 TNS2Q63HR2 1409 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 FPGTO14772 594 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 B4GALT4O60513 344 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 LYPLA1O75608 230 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 CLDN9O95484 217 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ARF4P18085 180 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 CDC25CP30307 473 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 LIPEQ05469 1076 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 E2F2Q14209 437 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 NDUFA9Q16795 377 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ADNP2Q6IQ32 1131 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 LCLAT1Q6UWP7 414 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 FRMD7Q6ZUT3 714 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 FAM35AQ86V20 835 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 RBM15BQ8NDT2 890 aaKnown RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 ADAMTS15Q8TE58 950 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 BTN2A3PQ96KV6 586 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 PGLYRP2Q96PD5 576 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 INTS10Q9NVR2 710 aaKnown RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 SEC14L3Q9UDX4 400 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 CEP170BQ9Y4F5 1589 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 A0A1W2PPM1 405 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 AP2A1O95782 977 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 C2P06681 752 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 HNRNPLP14866 589 aaKnown RBP eCLIP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 TAS2R40P59535 323 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 RALGDSQ12967 914 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 LCP2Q13094 533 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 SUZ12Q15022 739 aaKnown RBP7.56□□□□□ -1.2
CTNND1-233ENST00000532787 TIGD2Q4W5G0 525 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 NOMO2Q5JPE7 1267 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 GK5Q6ZS86 529 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 LAPTM4BQ86VI4 370 aa7.56□□□□□ -1.2
CTNND1-233ENST00000532787 PIGXQ8TBF5 258 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms