RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 K7EM74 188 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 DDX3XO00571 662 aaKnown RBP eCLIP17.14■□□□□ 0.333e-24■■■■■ 37.6
PKP3-208ENST00000531857 POLR1CO15160 346 aaPredicted RBP17.14■□□□□ 0.33
PKP3-208ENST00000531857 SNX2O60749 519 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 CLDN7O95471 211 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 PRLP01236 227 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 NTRK1P04629 796 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 PYGLP06737 847 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 GZMAP12544 262 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 SKILP12757 684 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 ACP5P13686 325 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 ZNF30P17039 623 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 TCN2P20062 427 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 MAN1A1P33908 653 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 STAT5AP42229 794 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 DSC2Q02487 901 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 LACTB2Q53H82 288 aaPredicted RBP17.14■□□□□ 0.33
PKP3-208ENST00000531857 BOLA3Q53S33 107 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 NDUFAF2Q8N183 169 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 KCNF1Q9H3M0 494 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 PCDH18Q9HCL0 1135 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 RTN4Q9NQC3 1192 aaKnown RBP17.14■□□□□ 0.33
PKP3-208ENST00000531857 VPS18Q9P253 973 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 MYO6Q9UM54 1294 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 CHKBQ9Y259 395 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 TP53TG5Q9Y2B4 290 aa17.14■□□□□ 0.33
PKP3-208ENST00000531857 SPENQ96T58 3664 aaKnown RBP17.14■□□□□ 0.33
PKP3-208ENST00000531857 FADS2P1A8MWK0 482 aa17.13■□□□□ 0.33
PKP3-208ENST00000531857 ZNF28P17035 718 aa17.13■□□□□ 0.33
PKP3-208ENST00000531857 EPHB1P54762 984 aa17.13■□□□□ 0.33
PKP3-208ENST00000531857 EPHA4P54764 986 aa17.13■□□□□ 0.33
PKP3-208ENST00000531857 ASIC2Q16515 512 aa17.13■□□□□ 0.33
PKP3-208ENST00000531857 SLC9B2Q86UD5 537 aa17.13■□□□□ 0.33
PKP3-208ENST00000531857 TRIT1Q9H3H1 467 aaKnown RBP17.13■□□□□ 0.33
PKP3-208ENST00000531857 SIDT1Q9NXL6 827 aaKnown RBP17.13■□□□□ 0.33
PKP3-208ENST00000531857 KCNMB2Q9Y691 235 aa17.13■□□□□ 0.33
PKP3-208ENST00000531857 RPS6KL1Q9Y6S9 549 aa17.13■□□□□ 0.33
PKP3-208ENST00000531857 SCINQ9Y6U3 715 aa17.13■□□□□ 0.33
PKP3-208ENST00000531857 GOLGA6L9A6NEM1 432 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 MTSS1O43312 755 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 FURINP09958 794 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 F3P13726 295 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 IL4RP24394 825 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 SERPINB6P35237 376 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 GFERP55789 205 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 MC1RQ01726 317 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 MMRN1Q13201 1228 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 TBX2Q13207 712 aaPredicted RBP17.12■□□□□ 0.33
PKP3-208ENST00000531857 CRTC2Q53ET0 693 aaPredicted RBP17.12■□□□□ 0.33
PKP3-208ENST00000531857 LYSMD3Q7Z3D4 306 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 CNGA4Q8IV77 575 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 FAM26EQ8N5C1 309 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 MIB2Q96AX9 1013 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 SH3KBP1Q96B97 665 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 NAP1L5Q96NT1 182 aaPredicted RBP17.12■□□□□ 0.33
PKP3-208ENST00000531857 PSMG3-AS1Q96PY0 264 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 HERPUD2Q9BSE4 406 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 TDRD1Q9BXT4 1180 aaKnown RBP17.12■□□□□ 0.33
PKP3-208ENST00000531857 POLR1EQ9GZS1 481 aaKnown RBP17.12■□□□□ 0.33
PKP3-208ENST00000531857 STN1Q9H668 368 aaKnown RBP17.12■□□□□ 0.33
PKP3-208ENST00000531857 MRPL47Q9HD33 250 aaKnown RBP17.12■□□□□ 0.33
PKP3-208ENST00000531857 PRDM8Q9NQV8 689 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 OGFRQ9NZT2 677 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 CPNE7Q9UBL6 633 aa17.12■□□□□ 0.33
PKP3-208ENST00000531857 MN1Q10571 1320 aaPredicted RBP17.12■□□□□ 0.33
PKP3-208ENST00000531857 MFSD11O43934 449 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 CD48P09326 243 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 DLSTP36957 453 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 FOXM1Q08050 763 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 KLRB1Q12918 225 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 SEPT6Q14141 434 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 MAP7Q14244 749 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 HENMT1Q5T8I9 393 aaKnown RBP17.11■□□□□ 0.33
PKP3-208ENST00000531857 ALG1LQ6GMV1 187 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 ESX1Q8N693 406 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 LPCAT1Q8NF37 534 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 ARRDC2Q8TBH0 407 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 LRRN4Q8WUT4 740 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 TEKT4Q8WW24 435 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 BTBD6Q96KE9 485 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 ZNF830Q96NB3 372 aaPredicted RBP17.11■□□□□ 0.33
PKP3-208ENST00000531857 PANX2Q96RD6 677 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.11■□□□□ 0.33
PKP3-208ENST00000531857 ULBP3Q9BZM4 244 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 ARFGAP3Q9NP61 516 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 AIPL1Q9NZN9 384 aa17.11■□□□□ 0.33
PKP3-208ENST00000531857 ICE1Q9Y2F5 2266 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 SPTAN1Q13813 2472 aaKnown RBP17.1■□□□□ 0.33
PKP3-208ENST00000531857 KIR2DS5A0A0G2JLQ3 304 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 A0A0G2JNG1 304 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 C1orf232A0A0U1RR37 186 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 BLACEA4D250 179 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 KIR2DS3K7RE56 304 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 ANKRD34CP0C6C1 535 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 TYRP1P17643 537 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 GARSP41250 739 aaKnown RBP17.1■□□□□ 0.33
PKP3-208ENST00000531857 SPINT3P49223 89 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 MLLT10P55197 1068 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 UBE2IP63279 158 aaKnown RBP17.1■□□□□ 0.33
PKP3-208ENST00000531857 SH3BP2P78314 561 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms