RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 DENND6AQ8IWF6 608 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 UNC45BQ8IWX7 931 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 CCDC170Q8IYT3 715 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 ADGRF4Q8IZF3 695 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 SLC25A41Q8N5S1 370 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 PARP16Q8N5Y8 322 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 LPGAT1Q92604 370 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 HDAC11Q96DB2 347 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 ZNF570Q96NI8 536 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 NUP85Q9BW27 656 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 FAM129AQ9BZQ8 928 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 TRPV4Q9HBA0 871 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 RNF146Q9NTX7 359 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 MTMR10Q9NXD2 777 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 HAO2Q9NYQ3 351 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 DNAJB9Q9UBS3 223 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 UTS2RQ9UKP6 389 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 ACAD8Q9UKU7 415 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 ERVK-11Q9UQG0 969 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 ZNF148Q9UQR1 794 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 WBP11Q9Y2W2 641 aaKnown RBP4.43□□□□□ -1.7
USP47-211ENST00000531513 RAP2CQ9Y3L5 183 aa4.43□□□□□ -1.7
USP47-211ENST00000531513 C2CD4BA6NLJ0 364 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 H3BQ06 376 aaPredicted RBP4.42□□□□□ -1.7
USP47-211ENST00000531513 PSMD14O00487 310 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 SPRY1O43609 319 aaPredicted RBP4.42□□□□□ -1.7
USP47-211ENST00000531513 BCL10O95999 233 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 TFPIP10646 304 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 NPY4RP50391 375 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 ARSEP51690 589 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 GPR143P51810 404 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 RALGDSQ12967 914 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 STIM1Q13586 685 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 CAPSQ13938 189 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 LPIN1Q14693 890 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 SNAPC1Q16533 368 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 MMEL1Q495T6 779 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 CBWD6Q4V339 395 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 CBWD3Q5JTY5 395 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 ARMC4Q5T2S8 1044 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 MPP7Q5T2T1 576 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 IYDQ6PHW0 289 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 ZNF793Q6ZN11 406 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 C18orf65Q6ZTR6 163 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 PIWIL3Q7Z3Z3 882 aaKnown RBP4.42□□□□□ -1.7
USP47-211ENST00000531513 IQCHQ86VS3 1027 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 ADHFE1Q8IWW8 467 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 TEKT4Q8WW24 435 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 OTULINQ96BN8 352 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 ARSGQ96EG1 525 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 ZNF419Q96HQ0 510 aaPredicted RBP4.42□□□□□ -1.7
USP47-211ENST00000531513 ZNF333Q96JL9 665 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 CDHR1Q96JP9 859 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 EGLN2Q96KS0 407 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 LINC00615Q96LM1 132 aaPredicted RBP4.42□□□□□ -1.7
USP47-211ENST00000531513 ZNF830Q96NB3 372 aaPredicted RBP4.42□□□□□ -1.7
USP47-211ENST00000531513 ACOX2Q99424 681 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 RTN4RQ9BZR6 473 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 DNAI2Q9GZS0 605 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 SPAG4Q9NPE6 437 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 DDX4Q9NQI0 724 aaKnown RBP4.42□□□□□ -1.7
USP47-211ENST00000531513 OLAHQ9NV23 265 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 CWC25Q9NXE8 425 aaPredicted RBP4.42□□□□□ -1.7
USP47-211ENST00000531513 DNAJB4Q9UDY4 337 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 FBXW11Q9UKB1 542 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 NFE2L3Q9Y4A8 694 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 SLC4A4Q9Y6R1 1079 aa4.42□□□□□ -1.7
USP47-211ENST00000531513 TRAV34A0A0B4J273 112 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 EDDM13A0A1B0GTR0 161 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 TMEM202A6NGA9 273 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 C4orf47A7E2U8 309 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 MAGEB17A8MXT2 336 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 LACTBL1A8MY62 500 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 ATP2A1O14983 1001 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 UGDHO60701 494 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 FMO6PO60774 539 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 SLCO2B1O94956 709 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 MMP3P08254 477 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 FGF2P09038 288 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 ENO3P13929 434 aaPredicted RBP4.41□□□□□ -1.7
USP47-211ENST00000531513 PRLRP16471 622 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 SP100P23497 879 aaPredicted RBP4.41□□□□□ -1.7
USP47-211ENST00000531513 MATR3P43243 847 aaKnown RBP eCLIP4.41□□□□□ -1.7
USP47-211ENST00000531513 HYAL1Q12794 435 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 GRSF1Q12849 480 aaKnown RBP eCLIP4.41□□□□□ -1.7
USP47-211ENST00000531513 SLMAPQ14BN4 828 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 DHRS7BQ6IAN0 325 aaPredicted RBP4.41□□□□□ -1.7
USP47-211ENST00000531513 PQLC2Q6ZP29 291 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 ADCK2Q7Z695 626 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 DDIASQ8IXT1 998 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 LRRC57Q8N9N7 239 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 OR10S1Q8NGN2 331 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 NUDCD1Q96RS6 583 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 SPATC1LQ9H0A9 340 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 SLCO5A1Q9H2Y9 848 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 GOLPH3LQ9H4A5 285 aa4.41□□□□□ -1.7
USP47-211ENST00000531513 PNRC2Q9NPJ4 139 aaKnown RBP4.41□□□□□ -1.7
USP47-211ENST00000531513 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.41□□□□□ -1.7
USP47-211ENST00000531513 DDX25Q9UHL0 483 aaKnown RBP4.41□□□□□ -1.7
USP47-211ENST00000531513 HACL1Q9UJ83 578 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms