RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 SERPINA4P29622 427 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 HOXD12P35452 270 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 MPLP40238 635 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 DPP6P42658 865 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 STT3AP46977 705 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 SUOXP51687 545 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 POLR2LP62875 67 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 OTUD4Q01804 1114 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 SPEM2Q0P670 501 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 CLN3Q13286 438 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 KLF1Q13351 362 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 IHHQ14623 411 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PRKD1Q15139 912 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 NOMO1Q15155 1222 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 CSRP2Q16527 193 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 UGP2Q16851 508 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 LRRC23Q53EV4 343 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 ANKRD39Q53RE8 183 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 FAM209AQ5JX71 171 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 THOC7Q6I9Y2 204 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC23A3Q6PIS1 610 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 BRAT1Q6PJG6 821 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 B4GALNT4Q76KP1 1039 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PARS2Q7L3T8 475 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 DGLUCYQ7Z3D6 616 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 MAATS1Q7Z4T9 603 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 ARHGAP22Q7Z5H3 698 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PRPF39Q86UA1 669 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 ZC3H18Q86VM9 953 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 ZSWIM9Q86XI8 627 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 GPR161Q8N6U8 529 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 SPERTQ8NA61 448 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 OR8H1Q8NGG4 311 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 CEP76Q8TAP6 659 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 ARRDC2Q8TBH0 407 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 ACTL9Q8TC94 416 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 MGARPQ8TDB4 240 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PIGKQ92643 395 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 USP7Q93009 1102 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 HAUS1Q96CS2 278 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 RBM18Q96H35 190 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 FEM1CQ96JP0 617 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 TEKT5Q96M29 485 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 SEMA3CQ99985 751 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 ORAI3Q9BRQ5 295 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC6A16Q9GZN6 736 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 NSRP1Q9H0G5 558 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 CARD9Q9H257 536 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PARD6AQ9NPB6 346 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PAPOLBQ9NRJ5 636 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 VPS45Q9NRW7 570 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 SEMA4GQ9NTN9 838 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 HAUS2Q9NVX0 235 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 IL20Q9NYY1 176 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 EIF2B4Q9UI10 523 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PNMA8BQ9ULN7 279 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 DMTF1Q9Y222 760 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PCDHGC4Q9Y5F7 938 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 DGKBQ9Y6T7 804 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PLXND1Q9Y4D7 1925 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 TCRBV7S2A1N4TA0A589 114 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 GOLGA6L9A6NEM1 432 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 MEI4A8MW99 385 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 AGRPO00253 132 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 KCNK3O14649 394 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 TOR1BO14657 336 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 POLR3GO15318 223 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 MTSS1O43312 755 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 RNGTTO60942 597 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 SOCS5O75159 536 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 DNAJC8O75937 253 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 FSBPO95073 299 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PCDH8O95206 1070 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 HLA-DQB2P05538 268 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 MMP2P08253 660 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PF4V1P10720 104 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 GNSP15586 552 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 ITIH2P19823 946 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 POU3F2P20265 443 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PTPN3P26045 913 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 RBL1P28749 1068 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 NUDT1P36639 197 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 POLD2P49005 469 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PPP2CBP62714 309 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PPP2CAP67775 309 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 IRX4P78413 519 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 DSC2Q02487 901 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 NIPAL4Q0D2K0 466 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 CCDC6Q16204 474 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 DUOXA1Q1HG43 343 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 TMEM52BQ4KMG9 183 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC45A4Q5BKX6 768 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 ZNF569Q5MCW4 686 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 FAM182AQ5T1J6 154 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PID1Q7Z2X4 250 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 TRIM69Q86WT6 500 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 HORMAD1Q86X24 394 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC13A5Q86YT5 568 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC44A2Q8IWA5 706 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 CCDC116Q8IYX3 515 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms