RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 RABL3Q5HYI8 236 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 C6orf10Q5SRN2 563 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 HMBOX1Q6NT76 420 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 KLHDC10Q6PID8 442 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 CHSY3Q70JA7 882 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 OTOP2Q7RTS6 562 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 TEX37Q96LM6 180 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 FBXO44Q9H4M3 255 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 SOX17Q9H6I2 414 aaPredicted RBP11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 SLAMF8Q9P0V8 285 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 RNF112Q9ULX5 631 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 RNF11Q9Y3C5 154 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 PTPRDP23468 1912 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 MYOFQ9NZM1 2061 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 MROH6A6NGR9 719 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 CBX4O00257 560 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 NME4O00746 187 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 SLC7A4O43246 635 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 DENRO43583 198 aaKnown RBP11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 GNAO1P09471 354 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 ITGB6P18564 788 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 HERVK_113P63132 956 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 BFSP2Q13515 415 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 KRT80Q6KB66 452 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 UGT3A1Q6NUS8 523 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 ZBTB49Q6ZSB9 765 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 ZNF683Q8IZ20 524 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 PAF1Q8N7H5 531 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 OR4L1Q8NH43 312 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 PRICKLE1Q96MT3 831 aaPredicted RBP11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 SLC25A23Q9BV35 468 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 ERVK-6Q9BXR3 956 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 RNF38Q9H0F5 515 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 MFSD1Q9H3U5 465 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 MRM3Q9HC36 420 aaKnown RBP11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 TLR8Q9NR97 1041 aaKnown RBP11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 CATSPERZQ9NTU4 200 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 MAP10Q9P2G4 905 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 GREB1Q4ZG55 1949 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 SPEGQ15772 3267 aa11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 GOLGA4Q13439 2230 aaKnown RBP11.9□□□□□ -0.5
CHMP1B-201ENST00000526991 SOCS2O14508 198 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 AZIN1O14977 448 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 ANGPT2O15123 496 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 RPL5P46777 297 aaKnown RBP11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 IKBKEQ14164 716 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 AAK1Q2M2I8 961 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 C18orf21Q32NC0 220 aaPredicted RBP11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 MSANTD2Q6P1R3 559 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 TICAM1Q8IUC6 712 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 NPAS4Q8IUM7 802 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 SLC22A9Q8IVM8 553 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 KLHDC8BQ8IXV7 354 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 ATP6V0D2Q8N8Y2 350 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 CCDC126Q96EE4 140 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 TMEM74Q96NL1 305 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 GPR21Q99679 349 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 POLR1EQ9GZS1 481 aaKnown RBP11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 SMG9Q9H0W8 520 aaKnown RBP11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 TLR9Q9NR96 1032 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 TMEM248Q9NWD8 314 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 ASB1Q9Y576 335 aa11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 ZFP37Q9Y6Q3 630 aaPredicted RBP11.9□□□□□ -0.51
CHMP1B-201ENST00000526991 ARHGAP10A1A4S6 786 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 SLC38A8A6NNN8 435 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 BTN3A1O00481 513 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 TRIM24O15164 1050 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 NIPSNAP2O75323 286 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 HNRNPCP07910 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 MTHFD2P13995 350 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 ZNF37AP17032 561 aaPredicted RBP11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 GPX3P22352 226 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 ITGB8P26012 769 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 PCSK6P29122 969 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 HK2P52789 917 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 RHDQ02161 417 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 SERINC3Q13530 473 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 UGT3A2Q3SY77 523 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 MRNIPQ6NTE8 343 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 LCA5Q86VQ0 697 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 CLYBLQ8N0X4 340 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 SIX5Q8N196 739 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 TRIML2Q8N7C3 387 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 LPCAT1Q8NF37 534 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 BTN2A3PQ96KV6 586 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 CCT7Q99832 543 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 ARNT2Q9HBZ2 717 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 ATP13A1Q9HD20 1204 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 EVLQ9UI08 416 aaPredicted RBP11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 RAB26Q9ULW5 256 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 COMMD10Q9Y6G5 202 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 BOLA2-SMG1P6H3BVE0 249 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 TNFAIP8O95379 198 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 KLKB1P03952 638 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 HSPA1AP0DMV8 641 aaKnown RBP11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 HSPA1BP0DMV9 641 aaKnown RBP11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 OXTRP30559 389 aa11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 ADSLP30566 484 aaPredicted RBP11.89□□□□□ -0.51
CHMP1B-201ENST00000526991 NDST2P52849 883 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms