RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 FAM151BQ6UXP7 276 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 ADGRG6Q86SQ4 1221 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 TRIM74Q86UV6 250 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 GALNT13Q8IUC8 556 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 TAB3Q8N5C8 712 aaPredicted RBP17.09■□□□□ 0.33
LMX1B-203ENST00000526117 OR13C4Q8NGS5 318 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 PTCD2Q8WV60 388 aaKnown RBP17.09■□□□□ 0.33
LMX1B-203ENST00000526117 GLMNQ92990 594 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 ULK4Q96C45 1275 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 SGSM3Q96HU1 749 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 APOLD1Q96LR9 279 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 OR2M4Q96R27 311 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 ZCCHC2Q9C0B9 1178 aaKnown RBP17.09■□□□□ 0.33
LMX1B-203ENST00000526117 IL22Q9GZX6 179 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 TMEM168Q9H0V1 697 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 CAAP1Q9H8G2 361 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 ATXN10Q9UBB4 475 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 TMEM98Q9Y2Y6 226 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 U3KQA8 63 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 MYLKQ15746 1914 aa17.09■□□□□ 0.33
LMX1B-203ENST00000526117 ARID1BQ8NFD5 2236 aaPredicted RBP17.09■□□□□ 0.33
LMX1B-203ENST00000526117 TRBV5-4A0A0C4DH59 114 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 SPAARA0A1B0GVQ0 90 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 FFAR2O15552 330 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 BUD23O43709 281 aaKnown RBP17.08■□□□□ 0.32
LMX1B-203ENST00000526117 CELA2BP08218 269 aaPredicted RBP17.08■□□□□ 0.32
LMX1B-203ENST00000526117 FTH1P19P0C7X4 201 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 MLNP12872 115 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 TPH1P17752 444 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 GRIA1P42261 906 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 GNPDA1P46926 289 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 NPY2RP49146 381 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 SARNPP82979 210 aaKnown RBP17.08■□□□□ 0.32
LMX1B-203ENST00000526117 C1orf61Q13536 156 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 PTK6Q13882 451 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 POU6F1Q14863 301 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 SKIDA1Q1XH10 827 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 DEFB133Q30KQ1 61 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 N4BP2L1Q5TBK1 243 aaPredicted RBP17.08■□□□□ 0.32
LMX1B-203ENST00000526117 RD3Q7Z3Z2 195 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 NRROSQ86YC3 692 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 ARL10Q8N8L6 244 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 MCUQ8NE86 351 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 OR6C4Q8NGE1 309 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 ZNF398Q8TD17 642 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 HEXDCQ8WVB3 486 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 ADAMTS14Q8WXS8 1223 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 CAPZA3Q96KX2 299 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 DDX47Q9H0S4 455 aaKnown RBP17.08■□□□□ 0.32
LMX1B-203ENST00000526117 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.08■□□□□ 0.32
LMX1B-203ENST00000526117 FKBPLQ9UIM3 349 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 KCTD3Q9Y597 815 aa17.08■□□□□ 0.32
LMX1B-203ENST00000526117 ASMTLO95671 621 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 ZNF8P17098 575 aaPredicted RBP17.07■□□□□ 0.32
LMX1B-203ENST00000526117 RPIAP49247 311 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 PTPRCAPQ14761 206 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 CERCAMQ5T4B2 595 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 DOK6Q6PKX4 331 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 SYT10Q6XYQ8 523 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 ZNF534Q76KX8 674 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 ZNF572Q7Z3I7 529 aaPredicted RBP17.07■□□□□ 0.32
LMX1B-203ENST00000526117 SNX20Q7Z614 316 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 RAB44Q7Z6P3 723 aaPredicted RBP17.07■□□□□ 0.32
LMX1B-203ENST00000526117 C17orf82Q86X59 251 aaPredicted RBP17.07■□□□□ 0.32
LMX1B-203ENST00000526117 GPR156Q8NFN8 814 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 CPT1BQ92523 772 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 DNAJC1Q96KC8 554 aaKnown RBP17.07■□□□□ 0.32
LMX1B-203ENST00000526117 MRM3Q9HC36 420 aaKnown RBP17.07■□□□□ 0.32
LMX1B-203ENST00000526117 MOSPD1Q9UJG1 213 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 GPR34Q9UPC5 381 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 DOLKQ9UPQ8 538 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 WASF3Q9UPY6 502 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 TCAF1Q9Y4C2 921 aa17.07■□□□□ 0.32
LMX1B-203ENST00000526117 CNOT1A5YKK6 2376 aaKnown RBP17.07■□□□□ 0.32
LMX1B-203ENST00000526117 IGLV3-16A0A075B6K0 115 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 EME2A4GXA9 379 aaPredicted RBP17.06■□□□□ 0.32
LMX1B-203ENST00000526117 KLHL33A6NCF5 533 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 PRR19A6NJB7 356 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 KMOO15229 486 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 GRID2O43424 1007 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 KCNJ13O60928 360 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 RFPL3O75679 317 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 ITGALP20701 1170 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 PMLP29590 882 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 PTGIRP43119 386 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 SHC2P98077 582 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 CTBSQ01459 385 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 TMEM115Q12893 351 aaPredicted RBP17.06■□□□□ 0.32
LMX1B-203ENST00000526117 DHX34Q14147 1143 aaKnown RBP17.06■□□□□ 0.32
LMX1B-203ENST00000526117 NR0B2Q15466 257 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 TRIP13Q15645 432 aaPredicted RBP17.06■□□□□ 0.32
LMX1B-203ENST00000526117 KHDC1Q4VXA5 237 aaKnown RBP17.06■□□□□ 0.32
LMX1B-203ENST00000526117 PCID2Q5JVF3 399 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 GPRC6AQ5T6X5 926 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 TSTD2Q5T7W7 516 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 TAF8Q7Z7C8 310 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 SLCO6A1Q86UG4 719 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 SLC35F3Q8IY50 421 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 OR13J1Q8NGT2 312 aa17.06■□□□□ 0.32
LMX1B-203ENST00000526117 NAT6Q93015 286 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms