RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 TRIM39Q9HCM9 518 aa20.57■□□□□ 0.88
CD44-222ENST00000526025 TMPRSS11EQ9UL52 423 aa20.57■□□□□ 0.88
CD44-222ENST00000526025 FNDC3AQ9Y2H6 1198 aaKnown RBP20.57■□□□□ 0.88
CD44-222ENST00000526025 ARID1BQ8NFD5 2236 aaPredicted RBP20.56■□□□□ 0.88
CD44-222ENST00000526025 PRSS38A1L453 326 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 E7ESA3 106 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 VEGFDO43915 354 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 ARSDP51689 593 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 HK3P52790 923 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 TMPRSS15P98073 1019 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 KIAA0930Q6ICG6 404 aaPredicted RBP20.56■□□□□ 0.88
CD44-222ENST00000526025 MPP5Q8N3R9 675 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 SDR16C5Q8N3Y7 309 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 NETO1Q8TDF5 533 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 HEXDCQ8WVB3 486 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 ART4Q93070 314 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 FOXP3Q9BZS1 431 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 ZCCHC2Q9C0B9 1178 aaKnown RBP20.56■□□□□ 0.88
CD44-222ENST00000526025 IL21RQ9HBE5 538 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 TM7SF3Q9NS93 570 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 RXFP3Q9NSD7 469 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 DNAJC28Q9NX36 388 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 SLC2A6Q9UGQ3 507 aa20.56■□□□□ 0.88
CD44-222ENST00000526025 PIKFYVEQ9Y2I7 2098 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 CEP250Q9BV73 2442 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 CCDC162PA2VCL2 907 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 EIF3HO15372 352 aaKnown RBP eCLIP20.55■□□□□ 0.88
CD44-222ENST00000526025 PIAS2O75928 621 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 USP1O94782 785 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 TTC4O95801 387 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 JUNDP17535 347 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 PAMP19021 973 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 PRAMEP78395 509 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 FNBP1LQ5T0N5 605 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 CASC4Q6P4E1 433 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 DBX2Q6ZNG2 339 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 KANSL1Q7Z3B3 1105 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 AGGF1Q8N302 714 aaeCLIP20.55■□□□□ 0.88
CD44-222ENST00000526025 NXPE1Q8N323 547 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 FSTL5Q8N475 847 aaPredicted RBP20.55■□□□□ 0.88
CD44-222ENST00000526025 SAP25Q8TEE9 199 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 OR1E3Q8WZA6 343 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 HDAC10Q969S8 669 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.55■□□□□ 0.88
CD44-222ENST00000526025 STAMBPL1Q96FJ0 436 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 PDXPQ96GD0 296 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 EBNA1BP2Q99848 306 aaKnown RBP20.55■□□□□ 0.88
CD44-222ENST00000526025 SLC13A1Q9BZW2 595 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 FAM114A2Q9NRY5 505 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 SPASTQ9UBP0 616 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 KLF15Q9UIH9 416 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 CRLS1Q9UJA2 301 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 PNMA8BQ9ULN7 279 aaPredicted RBP20.55■□□□□ 0.88
CD44-222ENST00000526025 OAS3Q9Y6K5 1087 aaKnown RBP20.55■□□□□ 0.88
CD44-222ENST00000526025 CSNK1G3Q9Y6M4 447 aa20.55■□□□□ 0.88
CD44-222ENST00000526025 BPTFQ12830 3046 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 CCL22O00626 93 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 CHUKO15111 745 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 UGT1A9O60656 530 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 TNFP01375 233 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 PGAM1P18669 254 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 UGT1A6P19224 532 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 UGT1A1P22309 533 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 UGT1A4P22310 534 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 NMBRP28336 390 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 FOXN2P32314 431 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 UGT1A3P35503 534 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 UGT1A5P35504 534 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 SLC7A5Q01650 507 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 DHX9Q08211 1270 aaKnown RBP20.54■□□□□ 0.88
CD44-222ENST00000526025 SUZ12Q15022 739 aaKnown RBP20.54■□□□□ 0.88
CD44-222ENST00000526025 GPRC6AQ5T6X5 926 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 STPG1Q5TH74 334 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 LYPLAL1Q5VWZ2 237 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 ADGRG6Q86SQ4 1221 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 TRIM74Q86UV6 250 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 KIAA2013Q8IYS2 634 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 OR4L1Q8NH43 312 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 TSACCQ96A04 125 aaPredicted RBP20.54■□□□□ 0.88
CD44-222ENST00000526025 MFSD3Q96ES6 412 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 SUDS3Q9H7L9 328 aaPredicted RBP20.54■□□□□ 0.88
CD44-222ENST00000526025 UGT1A7Q9HAW7 530 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 UGT1A10Q9HAW8 530 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 UGT1A8Q9HAW9 530 aa20.54■□□□□ 0.88
CD44-222ENST00000526025 TRNAU1APQ9NX07 287 aaKnown RBP20.54■□□□□ 0.88
CD44-222ENST00000526025 APOBEC3BQ9UH17 382 aaKnown RBP20.54■□□□□ 0.88
CD44-222ENST00000526025 COL5A1P20908 1838 aaPredicted RBP20.54■□□□□ 0.88
CD44-222ENST00000526025 IGLV3-16A0A075B6K0 115 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 CCDC78A2IDD5 438 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 NUAK1O60285 661 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 DNAJC6O75061 913 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 ASMTLO95671 621 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 GOT2P00505 430 aaKnown RBP20.53■□□□□ 0.88
CD44-222ENST00000526025 ACRV1P26436 265 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 GUCY2DQ02846 1103 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 ITIH4Q14624 930 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 INAVAQ3KP66 663 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 BBS9Q3SYG4 887 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 ANKRD20A4Q4UJ75 823 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 MSS51Q4VC12 460 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms