RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 ZCCHC10Q8TBK6 192 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 SLC44A1Q8WWI5 657 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 HERVK_113Q902F9 699 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 ABHD8Q96I13 439 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 EIF2AK1Q9BQI3 630 aaKnown RBP3.67□□□□□ -1.82
CSDE1-210ENST00000525878 BARHL2Q9NY43 387 aa3.67□□□□□ -1.82
CSDE1-210ENST00000525878 TEX13CA0A0J9YWL9 993 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 A0A1W2PQM1 296 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 OR5K3A6NET4 321 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 USP17L23D6RBM5 183 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 LDLRAD4O15165 306 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 KCNN4O15554 427 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 SORBS2O94875 1100 aaKnown RBP3.66□□□□□ -1.82
CSDE1-210ENST00000525878 CDAP32320 146 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 ELF1P32519 619 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 MRPS5P82675 430 aaKnown RBP3.66□□□□□ -1.82
CSDE1-210ENST00000525878 UBE3AQ05086 875 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 TUBB2AQ13885 445 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 ZNF239Q16600 458 aaKnown RBP3.66□□□□□ -1.82
CSDE1-210ENST00000525878 KRTCAP3Q53RY4 240 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 ZNF790Q6PG37 636 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 SLC22A25Q6T423 547 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 CPOQ8IVL8 374 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 FAM222BQ8WU58 562 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 MOCOSQ96EN8 888 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 KLHL15Q96M94 604 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 FUZQ9BT04 418 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 TUBB2BQ9BVA1 445 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 BICC1Q9H694 974 aaKnown RBP3.66□□□□□ -1.82
CSDE1-210ENST00000525878 ZBTB20Q9HC78 741 aaPredicted RBP3.66□□□□□ -1.82
CSDE1-210ENST00000525878 PCDHGB3Q9Y5G1 929 aa3.66□□□□□ -1.82
CSDE1-210ENST00000525878 H7C423 109 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 IGHV4-38-2P0DP08 117 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 CEACAM1P13688 526 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 DPEP1P16444 411 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 GNAQP50148 359 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 MLLT10P55197 1068 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 COG7P83436 770 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 ACVR2BQ13705 512 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 KIAA1644Q3SXP7 199 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 PLXDC2Q6UX71 529 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 DPPA4Q7L190 304 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 NKAPQ8N5F7 415 aaKnown RBP3.65□□□□□ -1.83
CSDE1-210ENST00000525878 PHF21AQ96BD5 680 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 ACOX2Q99424 681 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 MPHOSPH6Q99547 160 aaKnown RBP3.65□□□□□ -1.83
CSDE1-210ENST00000525878 RBM4BQ9BQ04 359 aaKnown RBP3.65□□□□□ -1.83
CSDE1-210ENST00000525878 LRMDAQ9H2I8 198 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 RPS10P5Q9NQ39 176 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 PYGO1Q9Y3Y4 419 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 SMCHD1A6NHR9 2005 aa3.65□□□□□ -1.83
CSDE1-210ENST00000525878 A6NL46 340 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 SH2B2O14492 632 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-210ENST00000525878 ANKRD28O15084 1053 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 SLC22A2O15244 555 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 DCXO43602 365 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 WISP2O76076 250 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 ZFAND5O76080 213 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 MSH3P20585 1137 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 HOXC9P31274 260 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 MAP2K2P36507 400 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 TRAPPC10P48553 1259 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 FGFBP1Q14512 234 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 ALG11Q2TAA5 492 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 SLC9B1Q4ZJI4 515 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 LCN10Q6JVE6 187 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 PAPD4Q6PIY7 484 aaKnown RBP3.64□□□□□ -1.83
CSDE1-210ENST00000525878 METTL7BQ6UX53 244 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 Q75L30 129 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 CCT6BQ92526 530 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 VGLL1Q99990 258 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 TMEM47Q9BQJ4 181 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 BRF2Q9HAW0 419 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 PPP1R14DQ9NXH3 145 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 MPP6Q9NZW5 540 aa3.64□□□□□ -1.83
CSDE1-210ENST00000525878 A0A0G2JNG1 304 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 HS3ST1O14792 307 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 NR3C1P04150 777 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 MCCP23508 829 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 MBTD1Q05BQ5 628 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 CAMK1Q14012 370 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 DRAP1Q14919 205 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-210ENST00000525878 KIR2DS5Q14953 304 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 COL28A1Q2UY09 1125 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 NAA35Q5VZE5 725 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 SPATA5Q8NB90 893 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 FGFBP3Q8TAT2 258 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 DNAAF4Q8WXU2 420 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 IGSF8Q969P0 613 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 ZBTB10Q96DT7 871 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 PCGF1Q9BSM1 259 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 CABLES2Q9BTV7 478 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 ISCA1Q9BUE6 129 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 RIC8AQ9NPQ8 531 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 MRPS28Q9Y2Q9 187 aaKnown RBP3.63□□□□□ -1.83
CSDE1-210ENST00000525878 AAR2Q9Y312 384 aaKnown RBP3.63□□□□□ -1.83
CSDE1-210ENST00000525878 JRKLQ9Y4A0 524 aa3.63□□□□□ -1.83
CSDE1-210ENST00000525878 IGKV6D-41A0A0C4DH26 115 aa3.62□□□□□ -1.83
CSDE1-210ENST00000525878 DUXAA6NLW8 204 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms