RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PDXDC1Q6P996 788 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 SMIM5Q71RC9 77 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 ZC3HC1Q86WB0 502 aaKnown RBP3.93□□□□□ -1.78
CD44-219ENST00000525685 CCDC13Q8IYE1 715 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 PRR26Q8N8Z3 221 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 AGBL3Q8NEM8 1001 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 HUS1BQ8NHY5 278 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 THOC3Q96J01 351 aaKnown RBP3.93□□□□□ -1.78
CD44-219ENST00000525685 PKNOX2Q96KN3 472 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 TMEM68Q96MH6 324 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 LRFN5Q96NI6 719 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 NCAPGQ9BPX3 1015 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 SH2D4AQ9H788 454 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 BRF2Q9HAW0 419 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 CLK4Q9HAZ1 481 aaKnown RBP3.93□□□□□ -1.78
CD44-219ENST00000525685 FBRSL1Q9HCM7 1045 aaKnown RBP3.93□□□□□ -1.78
CD44-219ENST00000525685 ASAH2Q9NR71 780 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 WWOXQ9NZC7 414 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 TSPYL4Q9UJ04 414 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 CDC14AQ9UNH5 594 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 NFE2L3Q9Y4A8 694 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 PSAT1Q9Y617 370 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 CAPN7Q9Y6W3 813 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 IGHV4-28A0A0C4DH34 117 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 A0A1W2PQM1 296 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 hDV102S1A0JD36 115 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 LINC01553A4QN01 128 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 PI4KAP2A4QPH2 592 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 PGPEP1LA6NFU8 196 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 LACTBL1A8MY62 500 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 ZIC3O60481 467 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 NKX2-2O95096 273 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 IPO7O95373 1038 aaKnown RBP3.92□□□□□ -1.78
CD44-219ENST00000525685 HOXB5P09067 269 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 ZNF853P0CG23 659 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 T-ENOLP0DO92 83 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 ZNF182P17025 639 aaPredicted RBP3.92□□□□□ -1.78
CD44-219ENST00000525685 HMGB2P26583 209 aaKnown RBP3.92□□□□□ -1.78
CD44-219ENST00000525685 ARRB2P32121 409 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 STX2P32856 288 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 SHMT1P34896 483 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 PBX3P40426 434 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 RGS2P41220 211 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 PEX5P50542 639 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 CRYZQ08257 329 aaKnown RBP3.92□□□□□ -1.78
CD44-219ENST00000525685 MAPRE1Q15691 268 aaKnown RBP3.92□□□□□ -1.78
CD44-219ENST00000525685 KRT24Q2M2I5 525 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 SLC45A4Q5BKX6 768 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 ITPRIPL1Q6GPH6 555 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 IKBIPQ70UQ0 350 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 LINGO2Q7L985 606 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 TBC1D1Q86TI0 1168 aaPredicted RBP3.92□□□□□ -1.78
CD44-219ENST00000525685 HAPLN4Q86UW8 402 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 NGEFQ8N5V2 710 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 TMEM116Q8NCL8 245 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 PSPC1Q8WXF1 523 aaKnown RBP3.92□□□□□ -1.78
CD44-219ENST00000525685 TMEM204Q9BSN7 226 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 IFIH1Q9BYX4 1025 aaKnown RBP3.92□□□□□ -1.78
CD44-219ENST00000525685 PLEKHA4Q9H4M7 779 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 KAT14Q9H8E8 782 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 SLC28A3Q9HAS3 691 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 TTC7AQ9ULT0 858 aaPredicted RBP3.92□□□□□ -1.78
CD44-219ENST00000525685 CORO1CQ9ULV4 474 aaPredicted RBP3.92□□□□□ -1.78
CD44-219ENST00000525685 SNX9Q9Y5X1 595 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 CEPT1Q9Y6K0 416 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 PIAS3Q9Y6X2 628 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 KIAA1551Q9HCM1 1747 aa3.92□□□□□ -1.78
CD44-219ENST00000525685 ATXN2Q99700 1313 aaKnown RBP3.92□□□□□ -1.78
CD44-219ENST00000525685 USP42Q9H9J4 1324 aaKnown RBP3.92□□□□□ -1.78
CD44-219ENST00000525685 FAM237AA0A1B0GTK4 181 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 TMEM202A6NGA9 273 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 MYO1GB0I1T2 1018 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 PRR23D1E9PI22 279 aaPredicted RBP3.91□□□□□ -1.78
CD44-219ENST00000525685 TIMM23O14925 209 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 KLK8O60259 260 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 SLC25A12O75746 678 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 GLUD1P00367 558 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 EIF2S1P05198 315 aaKnown RBP3.91□□□□□ -1.78
CD44-219ENST00000525685 ACAA1P09110 424 aaPredicted RBP3.91□□□□□ -1.78
CD44-219ENST00000525685 PRR23D2P0DMB1 279 aaPredicted RBP3.91□□□□□ -1.78
CD44-219ENST00000525685 ACADMP11310 421 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 G6PDP11413 515 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 AGAP20933 346 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 ICAM3P32942 547 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 PIK3CAP42336 1068 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 GLUD2P49448 558 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 MXI1P50539 228 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 CLNS1AP54105 237 aaKnown RBP3.91□□□□□ -1.78
CD44-219ENST00000525685 F2RL1P55085 397 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 ABATP80404 500 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 CALD1Q05682 793 aaKnown RBP3.91□□□□□ -1.78
CD44-219ENST00000525685 OLIG2Q13516 323 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 EFHC1Q5JVL4 640 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 TTI2Q6NXR4 508 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 TMEM154Q6P9G4 183 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 B3GNT6Q6ZMB0 384 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 C1orf122Q6ZSJ8 110 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 PXKQ7Z7A4 578 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 SLC35F3Q8IY50 421 aa3.91□□□□□ -1.78
CD44-219ENST00000525685 TEX11Q8IYF3 940 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms